RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 MS4A14Q96JA4 679 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 RNF14Q9UBS8 474 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 CUL1Q13616 776 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 XPO6Q96QU8 1125 aaKnown RBP13.5□□□□□ -0.25
EBF1-201ENST00000313708 TUBGCP2Q9BSJ2 902 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 IQCGQ9H095 443 aaKnown RBP13.5□□□□□ -0.25
EBF1-201ENST00000313708 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
EBF1-201ENST00000313708 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
EBF1-201ENST00000313708 ERVK-24P63145 666 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 TSGA10IPQ3SY00 556 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 SUCLG2Q96I99 432 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 PRMT1Q99873 361 aaKnown RBP13.5□□□□□ -0.25
EBF1-201ENST00000313708 GORASP1Q9BQQ3 440 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 KRT23Q9C075 422 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
EBF1-201ENST00000313708 FBXL5Q9UKA1 691 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 KIAA0556O60303 1618 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 CWF19L1Q69YN2 538 aaKnown RBP13.5□□□□□ -0.25
EBF1-201ENST00000313708 MDM1Q8TC05 714 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 EHD2Q9NZN4 543 aa13.5□□□□□ -0.25
EBF1-201ENST00000313708 HSPD1P10809 573 aaKnown RBP13.49□□□□□ -0.25
EBF1-201ENST00000313708 KIF11P52732 1056 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 CFAP61Q8NHU2 1237 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 ALDH8A1Q9H2A2 487 aaPredicted RBP13.49□□□□□ -0.25
EBF1-201ENST00000313708 MLXIPLQ9NP71 852 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 CHMP2BQ9UQN3 213 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 CHN1P15882 459 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 CA8P35219 290 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 YEATS2Q9ULM3 1422 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 LRRC14Q15048 493 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 CATIPQ7Z7H3 387 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 MMGT1Q8N4V1 131 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 ATXN2Q99700 1313 aaKnown RBP13.49□□□□□ -0.25
EBF1-201ENST00000313708 RANBP6O60518 1105 aaKnown RBP13.49□□□□□ -0.25
EBF1-201ENST00000313708 WLSQ5T9L3 541 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 TSEN2Q8NCE0 465 aaKnown RBP13.49□□□□□ -0.25
EBF1-201ENST00000313708 GSDMBQ8TAX9 411 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
EBF1-201ENST00000313708 PLTPP55058 493 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 EIF3BP55884 814 aaKnown RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 ZBED6P86452 979 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 KLHL30Q0D2K2 578 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 ASIC2Q16515 512 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 GRAMD4Q6IC98 578 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 NME8Q8N427 588 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 AENQ8WTP8 325 aaKnown RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 AZI2Q9H6S1 392 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 POLA2Q14181 598 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 HDAC7Q8WUI4 952 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 PRCCQ92733 491 aaPredicted RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 RWDD2AQ9UIY3 292 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 SEMA3EO15041 775 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 LGR5O75473 907 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 PDCD7Q8N8D1 485 aaKnown RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 LINS1Q8NG48 757 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 DEXIO95424 95 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 CMTR1Q8N1G2 835 aaKnown RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 SLC4A7Q9Y6M7 1214 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 NEK9Q8TD19 979 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 PAGE5Q96GU1 130 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 FMO2Q99518 471 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
EBF1-201ENST00000313708 PNMA2Q9UL42 364 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 LEMD3Q9Y2U8 911 aa13.48□□□□□ -0.25
EBF1-201ENST00000313708 LMNAP02545 664 aaKnown RBP13.47□□□□□ -0.25
EBF1-201ENST00000313708 UBTFL6P0CB48 400 aaPredicted RBP13.47□□□□□ -0.25
EBF1-201ENST00000313708 TBX2Q13207 712 aaPredicted RBP13.47□□□□□ -0.25
EBF1-201ENST00000313708 TTC38Q5R3I4 469 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 ANKRD20A2Q5SQ80 823 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 ANKRD20A1Q5TYW2 823 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 ANKRD20A3Q5VUR7 823 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 MIS18BP1Q6P0N0 1132 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 BICD1Q96G01 975 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 LAMC1P11047 1609 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 NVLO15381 856 aaKnown RBP13.47□□□□□ -0.25
EBF1-201ENST00000313708 APLFQ8IW19 511 aaPredicted RBP13.47□□□□□ -0.25
EBF1-201ENST00000313708 FERMT2Q96AC1 680 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 HIC2Q96JB3 615 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 ZMYND12Q9H0C1 365 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 UPP2O95045 317 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 TIMM10P62072 90 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 KRT26Q7Z3Y9 468 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 GHRP10912 638 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms