RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 LRRC41Q15345 812 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 CYP26C1Q6V0L0 522 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 MB21D1Q8N884 522 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-201ENST00000309660 AK8Q96MA6 479 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 PRPHP41219 470 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
PTPN2-201ENST00000309660 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 PROM2Q8N271 834 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 P2RX5Q93086 422 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 CNOT6LQ96LI5 555 aaKnown RBP12.92□□□□□ -0.34
PTPN2-201ENST00000309660 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 NOC4LQ9BVI4 516 aaKnown RBP12.92□□□□□ -0.34
PTPN2-201ENST00000309660 JMJD4Q9H9V9 463 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
PTPN2-201ENST00000309660 TBC1D7Q9P0N9 293 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 SLC27A3Q5K4L6 730 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 KRT79Q5XKE5 535 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L6PQ6QN14 398 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 KIFC2Q96AC6 838 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 MRFAP1Q9Y605 127 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 EFCAB8A8MWE9 144 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 NKRFO15226 690 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN2-201ENST00000309660 SRGNP10124 158 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 KCNB1Q14721 858 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
PTPN2-201ENST00000309660 RIOX1Q9H6W3 641 aa12.92□□□□□ -0.34
PTPN2-201ENST00000309660 LRRC10BA6NIK2 292 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 LGALS16A8MUM7 142 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
PTPN2-201ENST00000309660 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 TTI2Q6NXR4 508 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 NHSQ6T4R5 1651 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
PTPN2-201ENST00000309660 AGPAT5Q9NUQ2 364 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 CTAGE9A4FU28 777 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 GDF11O95390 407 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 ZSCAN20P17040 1043 aaPredicted RBP12.91□□□□□ -0.34
PTPN2-201ENST00000309660 SHMT1P34896 483 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 SLC1A4P43007 532 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 NT5C2P49902 561 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 OR8K1Q8NGG5 319 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 LARP4BQ92615 738 aaKnown RBP12.91□□□□□ -0.34
PTPN2-201ENST00000309660 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 TANGO6Q9C0B7 1094 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 NAV1Q8NEY1 1877 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 DLEC1Q9Y238 1755 aa12.91□□□□□ -0.34
PTPN2-201ENST00000309660 MYMKA6NI61 221 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 ENC1O14682 589 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 APBA3O96018 575 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 CRKP46108 304 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 ZNF771Q7L3S4 317 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 KIAA1328Q86T90 577 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 DDX25Q9UHL0 483 aaKnown RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 PPP1R11O60927 126 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 TAL1P17542 331 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 CCNE1P24864 410 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 EEF1GP26641 437 aaKnown RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 GABPAQ06546 454 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 GRB10Q13322 594 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 USH1GQ495M9 461 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 PNMA6FA0A0J9YX94 578 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 IPO7O95373 1038 aaKnown RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 H2AFXP16104 143 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 CNNM4Q6P4Q7 775 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 KCNK18Q7Z418 384 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 KIAA0895Q8NCT3 520 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 CUL5Q93034 780 aa12.9□□□□□ -0.34
PTPN2-201ENST00000309660 DHTKD1Q96HY7 919 aaPredicted RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 ZNHIT6Q9NWK9 470 aaKnown RBP12.9□□□□□ -0.34
PTPN2-201ENST00000309660 SBF2Q86WG5 1849 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 NDUFA10O95299 355 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 RHOXF2BP0C7M4 288 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 NPR1P16066 1061 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 CHMP4BP1P59074 171 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 TRIM14Q14142 442 aa12.89□□□□□ -0.35
PTPN2-201ENST00000309660 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms