RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CUL5Q93034 780 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 C12orf42Q96LP6 360 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 RPAP3Q9H6T3 665 aaPredicted RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 LOC285556D6RIA3 1793 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L15C9J2P7 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L13C9JLJ4 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L11C9JVI0 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L18D6R9N7 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L22D6RA61 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L17D6RBQ6 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L19D6RCP7 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L20D6RJB6 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 MEIS2O14770 477 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 PPP1R12BO60237 982 aaPredicted RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 CUTAO60888 179 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 MCM7P33993 719 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 NDUFA8P51970 172 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 ATP2C1P98194 919 aaPredicted RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 FMR1Q06787 632 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L24Q0WX57 530 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 PKN2Q16513 984 aaKnown RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 RESP18Q5W5W9 173 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP17L6PQ6QN14 398 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 C4orf32Q8N8J7 132 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 KRI1Q8N9T8 703 aaKnown RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 TBCKQ8TEA7 893 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 SYAP1Q96A49 352 aaPredicted RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 SLF1Q9BQI6 1058 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 PSTPIP2Q9H939 334 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 CEP131Q9UPN4 1083 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 SRPRBQ9Y5M8 271 aaKnown RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 ZNF536O15090 1300 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 C19orf81C9J6K1 198 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 PFKFB1P16118 471 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CMA1P23946 247 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 IREB2P48200 963 aaKnown RBP7.93□□□□□ -1.14
PTCD2-201ENST00000308077 MRE11P49959 708 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 FAM160A1Q05DH4 1040 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 PTGDRQ13258 359 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 SPECC1Q5M775 1068 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 MAP1SQ66K74 1059 aaPredicted RBP7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CTU1Q7Z7A3 348 aaKnown RBP7.93□□□□□ -1.14
PTCD2-201ENST00000308077 FMR1NBQ8N0W7 255 aaPredicted RBP7.93□□□□□ -1.14
PTCD2-201ENST00000308077 TANGO6Q9C0B7 1094 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CLSTN2Q9H4D0 955 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 DDX19AQ9NUU7 478 aaKnown RBP7.93□□□□□ -1.14
PTCD2-201ENST00000308077 HPSEQ9Y251 543 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 A0A0C4DFX4 3053 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 FAM237AA0A1B0GTK4 181 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 FSD2A1L4K1 749 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 TRAF5O00463 557 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 FLOT1O75955 427 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 BMP15O95972 392 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 NF2P35240 595 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 MRPL12P52815 198 aaKnown RBP7.93□□□□□ -1.14
PTCD2-201ENST00000308077 IL17AQ16552 155 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CAMK4Q16566 473 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 LETM2Q2VYF4 491 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CCDC73Q6ZRK6 1079 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 NEK8Q86SG6 692 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 LDHDQ86WU2 507 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 PRPF38AQ8NAV1 312 aaKnown RBP7.93□□□□□ -1.14
PTCD2-201ENST00000308077 WNK4Q96J92 1243 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 AGBL1Q96MI9 1066 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CSRNP2Q9H175 543 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 NUP62CLQ9H1M0 184 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 TMEM60Q9H2L4 133 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 ELP3Q9H9T3 547 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 PPP1R9AQ9ULJ8 1098 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CLEC11AQ9Y240 323 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CSADQ9Y600 493 aa7.93□□□□□ -1.14
PTCD2-201ENST00000308077 CCNT1O60563 726 aaKnown RBP7.92□□□□□ -1.14
PTCD2-201ENST00000308077 ICAM1P05362 532 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 LRSAM1Q6UWE0 723 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 USP49Q70CQ1 688 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 ANKRD13AQ8IZ07 590 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 TBC1D5Q92609 795 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 ATG4CQ96DT6 458 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 ANO3Q9BYT9 981 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 GLT8D2Q9H1C3 349 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 SLC38A10Q9HBR0 1119 aa7.92□□□□□ -1.14
PTCD2-201ENST00000308077 KRT37O76014 449 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 TDP2O95551 362 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 HOXA13P31271 388 aaPredicted RBP7.91□□□□□ -1.14
PTCD2-201ENST00000308077 TTLL12Q14166 644 aaPredicted RBP7.91□□□□□ -1.14
PTCD2-201ENST00000308077 ACAP1Q15027 740 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 RBM43Q6ZSC3 357 aaKnown RBP7.91□□□□□ -1.14
PTCD2-201ENST00000308077 ZNF579Q8NAF0 562 aaKnown RBP7.91□□□□□ -1.14
PTCD2-201ENST00000308077 REPS2Q8NFH8 660 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 CAPNS2Q96L46 248 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 PRO3102Q9H379 93 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 RAVER2Q9HCJ3 691 aaKnown RBP7.91□□□□□ -1.14
PTCD2-201ENST00000308077 A0A0G2JMZ2 1700 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 ABCB11O95342 1321 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 VWA3AA6NCI4 1184 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 SPDYE5A6NIY4 337 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms