RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CC2D2BQ6DHV5 1058 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 H2AFVQ71UI9 128 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 SPC25Q9HBM1 224 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 RAB20Q9NX57 234 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 ZSWIM5Q9P217 1185 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 QRICH2Q9H0J4 1663 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
USP42-201ENST00000306177 CRCPO75575 148 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 EEF1GP26641 437 aaKnown RBP17.49■□□□□ 0.39
USP42-201ENST00000306177 AOC3Q16853 763 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 GAS2L3Q86XJ1 694 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 STMN2Q93045 179 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 GJA10Q969M2 543 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 HSPA1LP34931 641 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 POLGP54098 1239 aaPredicted RBP17.49■□□□□ 0.39
USP42-201ENST00000306177 DIXDC1Q155Q3 683 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 EXOC3L4Q17RC7 722 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 KCTD1Q719H9 257 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 SULF1Q8IWU6 871 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 PPFIBP2Q8ND30 876 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 ADPGKQ9BRR6 497 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 MCAMP43121 646 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 NCAPG2Q86XI2 1143 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 C10orf67Q8IYJ2 551 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 SPICE1Q8N0Z3 855 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 PPM1KQ8N3J5 372 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 DCPSQ96C86 337 aaKnown RBP17.48■□□□□ 0.39
USP42-201ENST00000306177 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
USP42-201ENST00000306177 BCL2L12Q9HB09 334 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 EFCAB8A8MWE9 144 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 DLATP10515 647 aaKnown RBP17.48■□□□□ 0.39
USP42-201ENST00000306177 RXRBP28702 533 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
USP42-201ENST00000306177 SLC17A8Q8NDX2 589 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 NACA2Q9H009 215 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 LARGE1O95461 756 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 MYL1P05976 194 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 GTF2A1P52655 376 aaPredicted RBP17.48■□□□□ 0.39
USP42-201ENST00000306177 TBCKQ8TEA7 893 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 TBC1D31Q96DN5 1066 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 PIGSQ96S52 555 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 TBC1D8O95759 1140 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 FAM160B1Q5W0V3 765 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 GRK7Q8WTQ7 553 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
USP42-201ENST00000306177 RPAP1Q9BWH6 1393 aaPredicted RBP17.47■□□□□ 0.39
USP42-201ENST00000306177 MED14O60244 1454 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 SORBS3O60504 671 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 CASP14P31944 242 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 MECOMQ03112 1051 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 ERCC6LQ2NKX8 1250 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 CASC4Q6P4E1 433 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 CCDC127Q96BQ5 260 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 USP17L8P0C7I0 530 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 HADHQ16836 314 aaKnown RBP17.47■□□□□ 0.39
USP42-201ENST00000306177 VPS52Q8N1B4 723 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 VPS37BQ9H9H4 285 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 SETBP1Q9Y6X0 1596 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 E9PCH4 1651 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 GAP43P17677 238 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 NT5C2P49902 561 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 HAUS2Q9NVX0 235 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 BZW2Q9Y6E2 419 aaKnown RBP17.47■□□□□ 0.39
USP42-201ENST00000306177 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 NR5A1Q13285 461 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 RSAD2Q8WXG1 361 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 P2RX5Q93086 422 aa17.47■□□□□ 0.39
USP42-201ENST00000306177 RIOK1Q9BRS2 568 aaKnown RBP17.47■□□□□ 0.39
USP42-201ENST00000306177 CEP152O94986 1710 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 LRRIQ4A6NIV6 560 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 GMNNO75496 209 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 USP14P54578 494 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 ZNF658Q5TYW1 1059 aaPredicted RBP17.46■□□□□ 0.39
USP42-201ENST00000306177 P3H4Q92791 437 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 STK17AQ9UEE5 414 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 STAM2O75886 525 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 TMEM191BP0C7N4 346 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
USP42-201ENST00000306177 CTNNA1P35221 906 aaKnown RBP17.46■□□□□ 0.39
USP42-201ENST00000306177 ARHGAP27Q6ZUM4 889 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 ATP6V0A1Q93050 837 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 MIS12Q9H081 205 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 RIC8AQ9NPQ8 531 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 ATP11AP98196 1134 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 PPP2R5DQ14738 602 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 AFAP1L2Q8N4X5 818 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 CABS1Q96KC9 395 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 GDAP1L1Q96MZ0 367 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 WDR11Q9BZH6 1224 aa17.46■□□□□ 0.39
USP42-201ENST00000306177 PLEKHA4Q9H4M7 779 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms