RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MAN1B1Q9UKM7 699 aa15.25■□□□□ 0.03
PRKCB-201ENST00000303531 ATF2P15336 505 aa15.25■□□□□ 0.03
PRKCB-201ENST00000303531 TYW1Q9NV66 732 aaKnown RBP15.25■□□□□ 0.03
PRKCB-201ENST00000303531 SARNPP82979 210 aaKnown RBP15.24■□□□□ 0.03
PRKCB-201ENST00000303531 TNFAIP1Q13829 316 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 ODR4Q5SWX8 454 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 TTC19Q6DKK2 380 aaPredicted RBP15.24■□□□□ 0.03
PRKCB-201ENST00000303531 DHTKD1Q96HY7 919 aaPredicted RBP15.24■□□□□ 0.03
PRKCB-201ENST00000303531 DYNLL1P63167 89 aaKnown RBP15.24■□□□□ 0.03
PRKCB-201ENST00000303531 MYL7Q01449 175 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 USPL1Q5W0Q7 1092 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 MCF2L2Q86YR7 1114 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 LARGE1O95461 756 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 KRT26Q7Z3Y9 468 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 P2RX5Q93086 422 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 MMS19Q96T76 1030 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 ASAP1Q9ULH1 1129 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 KCTD16Q68DU8 428 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 H0YCG3 227 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 MMP1P03956 469 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 NR2F2P24468 414 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 CRKLP46109 303 aaKnown RBP15.24■□□□□ 0.03
PRKCB-201ENST00000303531 RAB3IPQ96QF0 476 aaPredicted RBP15.24■□□□□ 0.03
PRKCB-201ENST00000303531 PABPC4Q13310 644 aaKnown RBP eCLIP15.24■□□□□ 0.039e-10■■□□□ 11.7
PRKCB-201ENST00000303531 KAZNQ674X7 775 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 TRIM50Q86XT4 487 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 KSR1Q8IVT5 923 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 PPP4R1Q8TF05 950 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 ATP10DQ9P241 1426 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
PRKCB-201ENST00000303531 ATP7BP35670 1465 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 NR5A1Q13285 461 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 TAB3Q8N5C8 712 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 CPSF2Q9P2I0 782 aaKnown RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 BZW2Q9Y6E2 419 aaKnown RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 PASKQ96RG2 1323 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 NSFP46459 744 aaKnown RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 SMCR8Q8TEV9 937 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 AK8Q96MA6 479 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 PUS7LQ9H0K6 701 aaKnown RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 ABCB5Q2M3G0 1257 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 ZNF658Q5TYW1 1059 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 SIRT2Q8IXJ6 389 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 LOC102724428A0A0B4J2F2 783 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 FOSP01100 380 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 SIK1P57059 783 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 SPATS2Q86XZ4 545 aaKnown RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 PRKAB2O43741 272 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 APBA3O96018 575 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 LRRC41Q15345 812 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 CCDC170Q8IYT3 715 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 SUGCTQ9HAC7 445 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 TRIM37O94972 964 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 LIG3P49916 1009 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 APBA1Q02410 837 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 PTPN22Q9Y2R2 807 aa15.23■□□□□ 0.03
PRKCB-201ENST00000303531 SOS2Q07890 1332 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-201ENST00000303531 SH2B2O14492 632 aaPredicted RBP15.22■□□□□ 0.03
PRKCB-201ENST00000303531 BFSP1Q12934 665 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 POMGNT1Q8WZA1 660 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 OSBP2Q969R2 916 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 AMNQ9BXJ7 453 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ZNF148Q9UQR1 794 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 METP08581 1390 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 LMNB1P20700 586 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 MESDQ14696 234 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ASPRV1Q53RT3 343 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
PRKCB-201ENST00000303531 MED10Q9BTT4 135 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 CCPG1Q9ULG6 757 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 PHLPP2Q6ZVD8 1323 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 LRRIQ4A6NIV6 560 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 SEMA3EO15041 775 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 POLGP54098 1239 aaPredicted RBP15.22■□□□□ 0.03
PRKCB-201ENST00000303531 LRCH2Q5VUJ6 765 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 LCORLQ8N3X6 602 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ARHGAP42A6NI28 874 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 TMEM191BP0C7N4 346 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 PIK3CAP42336 1068 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 HAUS1Q96CS2 278 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 SEC31BQ9NQW1 1179 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ZBTB1Q9Y2K1 713 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ZMYND10O75800 440 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 ZNF853P0CG23 659 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 HAUS2Q9NVX0 235 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 AOC3Q16853 763 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 MUM1Q2TAK8 710 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 PGBD1Q96JS3 809 aa15.22■□□□□ 0.03
PRKCB-201ENST00000303531 TTC37Q6PGP7 1564 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 CSADQ9Y600 493 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 XDHP47989 1333 aa15.21■□□□□ 0.03
PRKCB-201ENST00000303531 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
PRKCB-201ENST00000303531 GPATCH4Q5T3I0 446 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms