RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 CPLX1O14810 134 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 PGK2P07205 417 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 SMARCA1P28370 1054 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 KCTD2Q14681 263 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 ZNF792Q3KQV3 632 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 ASPRV1Q53RT3 343 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 REPS2Q8NFH8 660 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 TRIM43Q96BQ3 446 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-202ENST00000301935 COL25A1Q9BXS0 654 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-202ENST00000301935 DIS3Q9Y2L1 958 aaKnown RBP17.5■□□□□ 0.39
UBXN1-202ENST00000301935 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 PARP1P09874 1014 aaKnown RBP17.49■□□□□ 0.39
UBXN1-202ENST00000301935 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 PDIA4P13667 645 aaKnown RBP17.49■□□□□ 0.39
UBXN1-202ENST00000301935 COPB2P35606 906 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 STAT3P40763 770 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 TLE2Q04725 743 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 STK3Q13188 491 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 GRM4Q14833 912 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 RNF180Q86T96 592 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 GMCL1Q96IK5 515 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
UBXN1-202ENST00000301935 F5H6K3 240 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 RAD21O60216 631 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 LARGE1O95461 756 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 PGK1P00558 417 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 CLTBP09497 229 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 ZNF865P0CJ78 1059 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-202ENST00000301935 AKR1A1P14550 325 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 TAL1P17542 331 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-202ENST00000301935 CCT2P78371 535 aaKnown RBP17.48■□□□□ 0.39
UBXN1-202ENST00000301935 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
UBXN1-202ENST00000301935 SMAD3P84022 425 aaKnown RBP17.48■□□□□ 0.39
UBXN1-202ENST00000301935 KLRC3Q07444 240 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 SCRN1Q12765 414 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 CCDC83Q8IWF9 413 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 CDX2Q99626 313 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-202ENST00000301935 CUL9Q8IWT3 2517 aa17.48■□□□□ 0.39
UBXN1-202ENST00000301935 VCANP13611 3396 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 A0A1W2PQ45 241 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-202ENST00000301935 A0A1W2PQY0 241 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-202ENST00000301935 ADAMTS4O75173 837 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 PDHBP11177 359 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 IFNAR1P17181 557 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 SLC1A4P43007 532 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 LRRC47Q8N1G4 583 aaKnown RBP17.47■□□□□ 0.39
UBXN1-202ENST00000301935 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
UBXN1-202ENST00000301935 LENG1Q96BZ8 264 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-202ENST00000301935 ITGB8P26012 769 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
UBXN1-202ENST00000301935 TRIM22Q8IYM9 498 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 SLF1Q9BQI6 1058 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 TEX13BQ9BXU2 312 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 SEMA6BQ9H3T3 888 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 FAM217BQ9NTX9 383 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-202ENST00000301935 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
UBXN1-202ENST00000301935 KLRF2D3W0D1 207 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 PLA2G6O60733 806 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
UBXN1-202ENST00000301935 NDUFB10O96000 172 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 BMP3P12645 472 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 CDC27P30260 824 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 ZNF543Q08ER8 600 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
UBXN1-202ENST00000301935 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 MSL3Q8N5Y2 521 aaKnown RBP17.45■□□□□ 0.38
UBXN1-202ENST00000301935 WASF1Q92558 559 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 NUP88Q99567 741 aaPredicted RBP17.45■□□□□ 0.38
UBXN1-202ENST00000301935 TTYH1Q9H313 450 aaPredicted RBP17.45■□□□□ 0.38
UBXN1-202ENST00000301935 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
UBXN1-202ENST00000301935 SYNGAP1Q96PV0 1343 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 SYNRGQ9UMZ2 1314 aa17.45■□□□□ 0.38
UBXN1-202ENST00000301935 RXRAP19793 462 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 PDCP20941 246 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 EPHB4P54760 987 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
UBXN1-202ENST00000301935 SSRP1Q08945 709 aaKnown RBP17.44■□□□□ 0.38
UBXN1-202ENST00000301935 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 CCDC144CPQ8IYA2 1237 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 RGS22Q8NE09 1264 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 MAFAQ8NHW3 353 aaPredicted RBP17.44■□□□□ 0.38
UBXN1-202ENST00000301935 SMARCC2Q8TAQ2 1214 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 RNPC3Q96LT9 517 aaKnown RBP17.44■□□□□ 0.38
UBXN1-202ENST00000301935 TSEN34Q9BSV6 310 aaKnown RBP17.44■□□□□ 0.38
UBXN1-202ENST00000301935 SPZ1Q9BXG8 430 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
UBXN1-202ENST00000301935 STK36Q9NRP7 1315 aa17.44■□□□□ 0.38
UBXN1-202ENST00000301935 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 TMEM265A0A087WTH1 108 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 RAG1P15918 1043 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms