RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 BCS1LQ9Y276 419 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 TDRD12Q587J7 1177 aaKnown RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 CCDC47Q96A33 483 aaKnown RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 NUDT12Q9BQG2 462 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 LUC7L2Q9Y383 392 aaKnown RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 NT5C2P49902 561 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 NR1I3Q14994 352 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 RBM26Q5T8P6 1007 aaKnown RBP17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 TRIML1Q8N9V2 468 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 CALML4Q96GE6 196 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 NOC4LQ9BVI4 516 aaKnown RBP17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 JADE2Q9NQC1 790 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 NPHP3-ACAD11A0A0J9YXS1 232 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 TTC26A0AVF1 554 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 ORC4O43929 436 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 CHRNA5P30532 468 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 STAT3P40763 770 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 APBA1Q02410 837 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 CALCRLQ16602 461 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 SH3RF1Q7Z6J0 888 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 DAGLAQ9Y4D2 1042 aa17.46■□□□□ 0.39
CHAF1A-201ENST00000301280 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 APBA3O96018 575 aa17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 OR52Z1P0C646 297 aa17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 CXCR5P32302 372 aa17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 TRIM65Q6PJ69 517 aa17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 TMEM139Q8IV31 216 aa17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 ARGLU1Q9NWB6 273 aaPredicted RBP17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 DUSP10Q9Y6W6 482 aa17.46■□□□□ 0.38
CHAF1A-201ENST00000301280 MMP10P09238 476 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 DDR1Q08345 913 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 CCDC122Q5T0U0 273 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 ADD3Q9UEY8 706 aaKnown RBP17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 STXBP3O00186 592 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 HSPA1LP34931 641 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 GNAQP50148 359 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
CHAF1A-201ENST00000301280 SLC37A4O43826 429 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 TCP11X2Q5H9J9 407 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 TCERG1LQ5VWI1 586 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 DGKHQ86XP1 1220 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 SFI1A8K8P3 1242 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 CCP110O43303 1012 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 BMP15O95972 392 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 VPS72Q15906 364 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 SH2D3AQ9BRG2 576 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 VEZTQ9HBM0 779 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 STX10O60499 249 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 PLA2G4AP47712 749 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 LRRC15Q8TF66 581 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 PARP3Q9Y6F1 533 aa17.44■□□□□ 0.38
CHAF1A-201ENST00000301280 PPEF1O14829 653 aaPredicted RBP17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 PLEKP08567 350 aaPredicted RBP17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 ERCC5P28715 1186 aaPredicted RBP17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 ZNF76P36508 570 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 SLC1A4P43007 532 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 CCDC102AQ96A19 550 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 TUBGCP2Q9BSJ2 902 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 MFAP3LO75121 409 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 GNA11P29992 359 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 ANKRD40Q6AI12 368 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 ZNHIT6Q9NWK9 470 aaKnown RBP17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 SMARCAL1Q9NZC9 954 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 ADGRG1Q9Y653 693 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 ROBO3Q96MS0 1386 aa17.43■□□□□ 0.38
CHAF1A-201ENST00000301280 TRAF5O00463 557 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 ERVK-24P63145 666 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 GRM4Q14833 912 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 GSPT2Q8IYD1 628 aaKnown RBP17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 UBR3Q6ZT12 1888 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 A0A1B0GTH6 734 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 ADCY7P51828 1080 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 CCDC40Q4G0X9 1142 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 PDXDC2PQ6P474 469 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 CACNA2D4Q7Z3S7 1137 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 CNOT6LQ96LI5 555 aaKnown RBP17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 TDRD3Q9H7E2 651 aaKnown RBP17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 TMEM51Q9NW97 253 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 ZBTB21Q9ULJ3 1066 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 E9PMD0 336 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 DDX39AO00148 427 aaKnown RBP17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 ZNF658Q5TYW1 1059 aaPredicted RBP17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 MIGA2Q7L4E1 593 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 CTAGE1Q96RT6 745 aa17.42■□□□□ 0.38
CHAF1A-201ENST00000301280 EPS15P42566 896 aa17.41■□□□□ 0.38
CHAF1A-201ENST00000301280 CHMP4BP1P59074 171 aa17.41■□□□□ 0.38
CHAF1A-201ENST00000301280 SBK1Q52WX2 424 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms