RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 N4BP2L2Q92802 583 aaPredicted RBP16.26■□□□□ 0.19
COL6A2-201ENST00000300527 UIMC1Q96RL1 719 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 SH2D4AQ9H788 454 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 ZNF233A6NK53 670 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 LRRC53A6NM62 1247 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 TCP1P17987 556 aaKnown RBP16.26■□□□□ 0.19
COL6A2-201ENST00000300527 SLC1A4P43007 532 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 EHHADHQ08426 723 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 CCDC40Q4G0X9 1142 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 NLRP14Q86W24 1093 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 CNPY4Q8N129 248 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 P2RX5Q93086 422 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 THAP9Q9H5L6 903 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 TMOD3Q9NYL9 352 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 SEC23AQ15436 765 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 ALS2CLQ60I27 953 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 TTI2Q6NXR4 508 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
COL6A2-201ENST00000300527 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 USP17L21D6R901 530 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 RPSAP08865 295 aaKnown RBP16.25■□□□□ 0.19
COL6A2-201ENST00000300527 TMOD1P28289 359 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 ARID4AP29374 1257 aaPredicted RBP16.25■□□□□ 0.19
COL6A2-201ENST00000300527 TMTC3Q6ZXV5 915 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 GOLPH3Q9H4A6 298 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 FAM205AQ6ZU69 1335 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 WTIPA6NIX2 430 aaPredicted RBP16.25■□□□□ 0.19
COL6A2-201ENST00000300527 PPP1R37O75864 691 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 PDHBP11177 359 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 GNAT2P19087 354 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 MEA1Q16626 185 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 DNAAF5Q86Y56 855 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 PRPF38AQ8NAV1 312 aaKnown RBP16.25■□□□□ 0.19
COL6A2-201ENST00000300527 MTMR8Q96EF0 704 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 PRDM11Q9NQV5 511 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 KLC4Q9NSK0 619 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 PLAAQ9Y263 795 aa16.25■□□□□ 0.19
COL6A2-201ENST00000300527 PLCG1P19174 1290 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 PAK2Q13177 524 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 NPY5RQ15761 445 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 CFAP221Q4G0U5 840 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 DDX42Q86XP3 938 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL6A2-201ENST00000300527 VGLL2Q8N8G2 317 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 EPN3Q9H201 632 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 ARHGAP23Q9P227 1491 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 TSPY2A6NKD2 308 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 GYG1P46976 350 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 CCDC13Q8IYE1 715 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 NOX5Q96PH1 765 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 CPVLQ9H3G5 476 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 ARFGEF2Q9Y6D5 1785 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 LRRC41Q15345 812 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 PTGISQ16647 500 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 LETM2Q2VYF4 491 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 NAALADL2Q58DX5 795 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 BLIDQ8IZY5 108 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 MYCBPAPQ8TBZ2 947 aa16.24■□□□□ 0.19
COL6A2-201ENST00000300527 FUT2Q10981 343 aa16.23■□□□□ 0.19
COL6A2-201ENST00000300527 UBLCP1Q8WVY7 318 aaPredicted RBP16.23■□□□□ 0.19
COL6A2-201ENST00000300527 CEP83Q9Y592 693 aa16.23■□□□□ 0.19
COL6A2-201ENST00000300527 TULP1O00294 542 aaPredicted RBP16.23■□□□□ 0.19
COL6A2-201ENST00000300527 LONP1P36776 959 aaKnown RBP16.23■□□□□ 0.19
COL6A2-201ENST00000300527 TROAPQ12815 778 aa16.23■□□□□ 0.19
COL6A2-201ENST00000300527 ZKSCAN4Q969J2 545 aaPredicted RBP16.23■□□□□ 0.19
COL6A2-201ENST00000300527 PYM1Q9BRP8 204 aaKnown RBP16.23■□□□□ 0.19
COL6A2-201ENST00000300527 HAUS2Q9NVX0 235 aa16.23■□□□□ 0.19
COL6A2-201ENST00000300527 ODF2LQ9ULJ1 636 aa16.23■□□□□ 0.19
COL6A2-201ENST00000300527 PALMO75781 387 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 CYP2D6P10635 497 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
COL6A2-201ENST00000300527 CASKIN2Q8WXE0 1202 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 TBC1D31Q96DN5 1066 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 TLR10Q9BXR5 811 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 TRIM31Q9BZY9 425 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 SLC40A1Q9NP59 571 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 RBM28Q9NW13 759 aaKnown RBP16.22■□□□□ 0.19
COL6A2-201ENST00000300527 CCNE1P24864 410 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 CABP7Q86V35 215 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 FAM114A1Q8IWE2 563 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 SMIM23A6NLE4 172 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 STARD3NLO95772 234 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 PDE6BP35913 854 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 FNTAP49354 379 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 TNFRSF25Q93038 417 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 VAT1LQ9HCJ6 419 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 TCP11L1Q9NUJ3 509 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 CNTNAP5Q8WYK1 1306 aa16.22■□□□□ 0.19
COL6A2-201ENST00000300527 CHUKO15111 745 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 PDE8AO60658 829 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 MDH1P40925 334 aaKnown RBP16.21■□□□□ 0.19
COL6A2-201ENST00000300527 TECP42680 631 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 BICDL2A1A5D9 508 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 KLRC4O43908 158 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 SKOR1P84550 965 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 AP1M1Q9BXS5 423 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 TTYH3Q9C0H2 523 aa16.21■□□□□ 0.19
COL6A2-201ENST00000300527 SLC24A3Q9HC58 644 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms