RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 DACH1Q9UI36 760 aa25.72■■□□□ 1.71
VSTM4-201ENST00000298454 HACL1Q9UJ83 578 aa25.72■■□□□ 1.71
VSTM4-201ENST00000298454 GTPBP6O43824 516 aaPredicted RBP25.71■■□□□ 1.71
VSTM4-201ENST00000298454 ASNSP08243 561 aa25.71■■□□□ 1.71
VSTM4-201ENST00000298454 CCDC144BQ3MJ40 725 aa25.71■■□□□ 1.71
VSTM4-201ENST00000298454 IGSF22Q8N9C0 903 aa25.71■■□□□ 1.71
VSTM4-201ENST00000298454 FANCLQ9NW38 375 aa25.71■■□□□ 1.71
VSTM4-201ENST00000298454 IFNKQ9P0W0 207 aa25.71■■□□□ 1.71
VSTM4-201ENST00000298454 KIF4BQ2VIQ3 1234 aa25.7■■□□□ 1.7
VSTM4-201ENST00000298454 TRMT44Q8IYL2 757 aaKnown RBP25.7■■□□□ 1.7
VSTM4-201ENST00000298454 MED15Q96RN5 788 aa25.7■■□□□ 1.7
VSTM4-201ENST00000298454 P2RX7Q99572 595 aaKnown RBP25.7■■□□□ 1.7
VSTM4-201ENST00000298454 XPO4Q9C0E2 1151 aaKnown RBP25.7■■□□□ 1.7
VSTM4-201ENST00000298454 DDX25Q9UHL0 483 aaKnown RBP25.7■■□□□ 1.7
VSTM4-201ENST00000298454 ZNF500O60304 480 aaPredicted RBP25.69■■□□□ 1.7
VSTM4-201ENST00000298454 TPM3P06753 285 aa25.69■■□□□ 1.7
VSTM4-201ENST00000298454 SMYD4Q8IYR2 804 aaPredicted RBP25.69■■□□□ 1.7
VSTM4-201ENST00000298454 ANO3Q9BYT9 981 aa25.69■■□□□ 1.7
VSTM4-201ENST00000298454 CD44P16070 742 aaKnown RBP25.69■■□□□ 1.7
VSTM4-201ENST00000298454 MMTAG2Q9BU76 263 aaKnown RBP25.69■■□□□ 1.7
VSTM4-201ENST00000298454 PLCG1P19174 1290 aa25.68■■□□□ 1.7
VSTM4-201ENST00000298454 FANCCQ00597 558 aa25.68■■□□□ 1.7
VSTM4-201ENST00000298454 DEFB129Q9H1M3 183 aa25.68■■□□□ 1.7
VSTM4-201ENST00000298454 SH2D4AQ9H788 454 aa25.68■■□□□ 1.7
VSTM4-201ENST00000298454 OPLAHO14841 1288 aa25.68■■□□□ 1.7
VSTM4-201ENST00000298454 FXR2P51116 673 aaKnown RBP eCLIP25.68■■□□□ 1.7
VSTM4-201ENST00000298454 KIFC2Q96AC6 838 aa25.68■■□□□ 1.7
VSTM4-201ENST00000298454 ENOX1Q8TC92 643 aaKnown RBP25.67■■□□□ 1.7
VSTM4-201ENST00000298454 HAS1Q92839 578 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 GJA10Q969M2 543 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 ZNF341Q9BYN7 854 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 LRWD1Q9UFC0 647 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 NFE2L3Q9Y4A8 694 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 ERCC5P28715 1186 aaPredicted RBP25.66■■□□□ 1.7
VSTM4-201ENST00000298454 AP3B2Q13367 1082 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 HSP90AA4PQ58FG1 418 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 KLHL10Q6JEL2 608 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 KBTBD4Q9NVX7 518 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 MYH7BA7E2Y1 1941 aa25.66■■□□□ 1.7
VSTM4-201ENST00000298454 POTEMA6NI47 508 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 RPN1P04843 607 aaKnown RBP25.65■■□□□ 1.7
VSTM4-201ENST00000298454 GCFC2P16383 781 aaKnown RBP25.65■■□□□ 1.7
VSTM4-201ENST00000298454 TMEM266Q2M3C6 531 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 NBPF12Q5TAG4 269 aaPredicted RBP25.65■■□□□ 1.7
VSTM4-201ENST00000298454 CCDC174Q6PII3 467 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 SAMD1Q6SPF0 538 aaPredicted RBP25.65■■□□□ 1.7
VSTM4-201ENST00000298454 ARHGAP27Q6ZUM4 889 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 FBXO28Q9NVF7 368 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 PPP1R3GB7ZBB8 358 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 CHURC1Q8WUH1 139 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 FEZ1Q99689 392 aa25.65■■□□□ 1.7
VSTM4-201ENST00000298454 HOXA13P31271 388 aaPredicted RBP25.64■■□□□ 1.7
VSTM4-201ENST00000298454 USP11P51784 963 aa25.64■■□□□ 1.7
VSTM4-201ENST00000298454 LRMPQ12912 555 aa25.64■■□□□ 1.7
VSTM4-201ENST00000298454 FILIP1Q7Z7B0 1213 aa25.64■■□□□ 1.7
VSTM4-201ENST00000298454 RANBP17Q9H2T7 1088 aaKnown RBP25.64■■□□□ 1.7
VSTM4-201ENST00000298454 H7C1D1 291 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 SERPINC1P01008 464 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 CRYGNQ8WXF5 182 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 UIMC1Q96RL1 719 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 PYCARDQ9ULZ3 195 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 STX17P56962 302 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 PDIA5Q14554 519 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 C17orf53Q8N3J3 647 aaPredicted RBP25.63■■□□□ 1.69
VSTM4-201ENST00000298454 TRPM4Q8TD43 1214 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 NAP1L4Q99733 375 aaKnown RBP25.63■■□□□ 1.69
VSTM4-201ENST00000298454 CUEDC2Q9H467 287 aa25.63■■□□□ 1.69
VSTM4-201ENST00000298454 SPDYE3A6NKU9 549 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 ARHGAP4P98171 946 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 GRB10Q13322 594 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 ARID5BQ14865 1188 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 CT47A1Q5JQC4 288 aaPredicted RBP25.62■■□□□ 1.69
VSTM4-201ENST00000298454 ANGEL2Q5VTE6 544 aaKnown RBP25.62■■□□□ 1.69
VSTM4-201ENST00000298454 CALML4Q96GE6 196 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 RAB34Q9BZG1 259 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 SPON1Q9HCB6 807 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 SAMSN1Q9NSI8 373 aaKnown RBP25.62■■□□□ 1.69
VSTM4-201ENST00000298454 MARCH6O60337 910 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 PLA2G6O60733 806 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 ZNF18P17022 549 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 UBASH3AP57075 661 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 PRAMEF18Q5VWM3 479 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 FAM160B2Q86V87 743 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 CACTINQ8WUQ7 758 aaKnown RBP25.62■■□□□ 1.69
VSTM4-201ENST00000298454 NUDT12Q9BQG2 462 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 RMND1Q9NWS8 449 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 FEM1BQ9UK73 627 aa25.62■■□□□ 1.69
VSTM4-201ENST00000298454 ATAD5Q96QE3 1844 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 INPP5BP32019 993 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 DGKZQ13574 1117 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 ZNF658Q5TYW1 1059 aaPredicted RBP25.61■■□□□ 1.69
VSTM4-201ENST00000298454 MCTP2Q6DN12 878 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 PNMA5Q96PV4 448 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 CYP3A7-CYP3A51PA0A087WV96 503 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 CTNND1O60716 968 aaKnown RBP25.61■■□□□ 1.69
VSTM4-201ENST00000298454 CYP3A7P24462 503 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 MBOAT7Q96N66 472 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 NAP1L5Q96NT1 182 aaPredicted RBP25.61■■□□□ 1.69
VSTM4-201ENST00000298454 MAGEF1Q9HAY2 307 aa25.61■■□□□ 1.69
VSTM4-201ENST00000298454 GDAQ9Y2T3 454 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms