RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ABCF2Q9UG63 623 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 ROBO1Q9Y6N7 1651 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 FAM205AQ6ZU69 1335 aa21.33■■□□□ 1.01
TRA2A-201ENST00000297071 USP17L12C9JPN9 530 aa21.33■■□□□ 1.01
TRA2A-201ENST00000297071 USP17L21D6R901 530 aa21.33■■□□□ 1.01
TRA2A-201ENST00000297071 MTIF2P46199 727 aaKnown RBP21.33■■□□□ 1.01
TRA2A-201ENST00000297071 RCSD1Q6JBY9 416 aa21.33■■□□□ 1.01
TRA2A-201ENST00000297071 CNNM4Q6P4Q7 775 aa21.33■■□□□ 1.01
TRA2A-201ENST00000297071 CCDC84Q86UT8 332 aaPredicted RBP21.33■■□□□ 1.01
TRA2A-201ENST00000297071 PAGR1Q9BTK6 254 aa21.33■■□□□ 1.01
TRA2A-201ENST00000297071 NOC4LQ9BVI4 516 aaKnown RBP21.33■■□□□ 1.01
TRA2A-201ENST00000297071 PCDHA13Q9Y5I0 950 aa21.33■■□□□ 1.01
TRA2A-201ENST00000297071 COL14A1Q05707 1796 aaKnown RBP21.32■■□□□ 1
TRA2A-201ENST00000297071 SHTN1A0MZ66 631 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 GUCY2CP25092 1073 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 DYNLL1P63167 89 aaKnown RBP21.32■■□□□ 1
TRA2A-201ENST00000297071 C2orf54Q08AI8 447 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 CAVIN4Q5BKX8 364 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 SWT1Q5T5J6 900 aaKnown RBP21.32■■□□□ 1
TRA2A-201ENST00000297071 CENPPQ6IPU0 288 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 LZTS2Q9BRK4 669 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 TRIM9Q9C026 710 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 PCDHA6Q9UN73 950 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 SIK3Q9Y2K2 1263 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 PCDHA8Q9Y5H6 950 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 ZNF263O14978 683 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 MAPK8IP2Q13387 824 aaPredicted RBP21.32■■□□□ 1
TRA2A-201ENST00000297071 ANKRD40Q6AI12 368 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 MMS22LQ6ZRQ5 1243 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 CD302Q8IX05 232 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 MREGQ8N565 214 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 OSBPL9Q96SU4 736 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 DCP1AQ9NPI6 582 aaPredicted RBP21.32■■□□□ 1
TRA2A-201ENST00000297071 TCP11L1Q9NUJ3 509 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 STIM2Q9P246 746 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 LRWD1Q9UFC0 647 aa21.32■■□□□ 1
TRA2A-201ENST00000297071 KIF13BQ9NQT8 1826 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 ZNF831Q5JPB2 1677 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 GRIN2DO15399 1336 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 CYP2D7A0A087X1C5 515 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 SSU72P8A0A1W2PR75 194 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 PES1O00541 588 aaKnown RBP21.31■■□□□ 1
TRA2A-201ENST00000297071 ZNF185O15231 689 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 PAFAH1B1P43034 410 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 SND1Q7KZF4 910 aaKnown RBP eCLIP21.31■■□□□ 1
TRA2A-201ENST00000297071 CABP7Q86V35 215 aa21.31■■□□□ 1
TRA2A-201ENST00000297071 RIN2Q8WYP3 895 aaPredicted RBP21.31■■□□□ 1
TRA2A-201ENST00000297071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.31■■□□□ 1
TRA2A-201ENST00000297071 IFIH1Q9BYX4 1025 aaKnown RBP21.31■■□□□ 1
TRA2A-201ENST00000297071 SMIM22K7EJ46 135 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 EXOC5O00471 708 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 ADAMTS2O95450 1211 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 PDE4DQ08499 809 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 B4GALNT4Q76KP1 1039 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 EIF1ADQ8N9N8 165 aaKnown RBP21.3■■□□□ 1
TRA2A-201ENST00000297071 ZNF384Q8TF68 577 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 NSUN4Q96CB9 384 aaKnown RBP21.3■■□□□ 1
TRA2A-201ENST00000297071 NUCKS1Q9H1E3 243 aaKnown RBP21.3■■□□□ 1
TRA2A-201ENST00000297071 TMEM60Q9H2L4 133 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 RNF216Q9NWF9 866 aaPredicted RBP21.3■■□□□ 1
TRA2A-201ENST00000297071 ROBO3Q96MS0 1386 aa21.3■■□□□ 1
TRA2A-201ENST00000297071 PVALEFA0A1B0GWK0 134 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 RBAK-RBAKDNI3L0D1 243 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 HSF2BPO75031 334 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 CAMTA2O94983 1202 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 GTF2A1P52655 376 aaPredicted RBP21.29■■□□□ 1
TRA2A-201ENST00000297071 SF3B3Q15393 1217 aaKnown RBP21.29■■□□□ 1
TRA2A-201ENST00000297071 MAN2A1Q16706 1144 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 VWA3BQ502W6 1294 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 FBXO33Q7Z6M2 555 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 RASSF8Q8NHQ8 419 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 CEP89Q96ST8 783 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 LRRC1Q9BTT6 524 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 BSDC1Q9NW68 430 aaPredicted RBP21.29■■□□□ 1
TRA2A-201ENST00000297071 ARHGAP20Q9P2F6 1191 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 NAV1Q8NEY1 1877 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 COL4A1P02462 1669 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 ADAMTS3O15072 1205 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 KIF11P52732 1056 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 CCDC96Q2M329 555 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 HAUS3Q68CZ6 603 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 KRT25Q7Z3Z0 450 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 SYN2Q92777 582 aaPredicted RBP21.29■■□□□ 1
TRA2A-201ENST00000297071 CCDC87Q9NVE4 849 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 BARHL2Q9NY43 387 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 GGA2Q9UJY4 613 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 TFR2Q9UP52 801 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 FAM169AQ9Y6X4 670 aa21.29■■□□□ 1
TRA2A-201ENST00000297071 MYH14Q7Z406 1995 aaKnown RBP21.28■■□□□ 1
TRA2A-201ENST00000297071 MACROD2A1Z1Q3 448 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 GRID2IPA4D2P6 1211 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 RGL2O15211 777 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 OR52Z1P0C646 297 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 USP8P40818 1118 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 INTS5Q6P9B9 1019 aaKnown RBP21.28■■□□□ 1
TRA2A-201ENST00000297071 ANKRD18AQ8IVF6 992 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 DMGDHQ9UI17 866 aaKnown RBP21.28■■□□□ 1
TRA2A-201ENST00000297071 CAPN6Q9Y6Q1 641 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 DUSP10Q9Y6W6 482 aa21.28■■□□□ 1
TRA2A-201ENST00000297071 TSPY2A6NKD2 308 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms