RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 TRIM10Q9UDY6 481 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 MRFAP1Q9Y605 127 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 USP17L10C9JJH3 530 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 TTLL1O95922 423 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 MTIF2P46199 727 aaKnown RBP17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 MAP3K9P80192 1104 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 LRRC10BA6NIK2 292 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 NT5C2P49902 561 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 MB21D1Q8N884 522 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 NUDT12Q9BQG2 462 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 ITIH6Q6UXX5 1313 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 KCNB1Q14721 858 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 SLC35F6Q8N357 371 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 AK8Q96MA6 479 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 TUBGCP2Q9BSJ2 902 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 JMJD4Q9H9V9 463 aa17.7■□□□□ 0.42
NCKIPSD-201ENST00000294129 PPP1R11O60927 126 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 SRGNP10124 158 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 H2AFXP16104 143 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 TRIM21P19474 475 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 SNAP25P60880 206 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 GABPAQ06546 454 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 ASPRV1Q53RT3 343 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 CYP26C1Q6V0L0 522 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 DUSP9Q99956 384 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 LGALS16A8MUM7 142 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 EFCAB8A8MWE9 144 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 ONECUT3O60422 494 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 SHMT1P34896 483 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 TMTC1Q8IUR5 882 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 SNX29Q8TEQ0 813 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 P2RX5Q93086 422 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 CNOT6LQ96LI5 555 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 GUCA1BQ9UMX6 200 aa17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 LUC7L2Q9Y383 392 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-201ENST00000294129 MMP10P09238 476 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 TEKT1Q969V4 418 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 GRB10Q13322 594 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 LRRC41Q15345 812 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 SV2BQ7L1I2 683 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 AGPAT5Q9NUQ2 364 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 ADAMTSL1Q8N6G6 1762 aa17.68■□□□□ 0.42
NCKIPSD-201ENST00000294129 MYMKA6NI61 221 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 HLA-DOAP06340 250 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 TBC1D8BQ0IIM8 1120 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 TSR1Q2NL82 804 aaKnown RBP17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 TMCO3Q6UWJ1 677 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 KRT222Q8N1A0 295 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 KIAA0895Q8NCT3 520 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 CCDC51Q96ER9 411 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L15C9J2P7 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L13C9JLJ4 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L11C9JVI0 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L18D6R9N7 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L22D6RA61 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L17D6RBQ6 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L19D6RCP7 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L20D6RJB6 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 ZBTB22O15209 634 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L24Q0WX57 530 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 USP17L6PQ6QN14 398 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 ARGLU1Q9NWB6 273 aaPredicted RBP17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 KIF20AO95235 890 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 TAL1P17542 331 aaPredicted RBP17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 EEF1GP26641 437 aaKnown RBP17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 AMPD3Q01432 767 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 RAD51AP2Q09MP3 1159 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 APOBEC3HQ6NTF7 200 aaKnown RBP17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 ZNF771Q7L3S4 317 aaPredicted RBP17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 KCNK18Q7Z418 384 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 GLIS3Q8NEA6 775 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 NOC4LQ9BVI4 516 aaKnown RBP17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 THAP9Q9H5L6 903 aa17.67■□□□□ 0.42
NCKIPSD-201ENST00000294129 EDIL3O43854 480 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 CCNE1P24864 410 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 CRKP46108 304 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 OR8K1Q8NGG5 319 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 BLOC1S4Q9NUP1 217 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 TBC1D7Q9P0N9 293 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 PNMA6FA0A0J9YX94 578 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 IKQ13123 557 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 LARP4BQ92615 738 aaKnown RBP17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 DHTKD1Q96HY7 919 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 PNMA5Q96PV4 448 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 MTMR9Q96QG7 549 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 CUEDC2Q9H467 287 aa17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 DDX25Q9UHL0 483 aaKnown RBP17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 EPN1Q9Y6I3 576 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-201ENST00000294129 CTAGE9A4FU28 777 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 MYL1P05976 194 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 NPR1P16066 1061 aa17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 CACNB1Q02641 598 aaPredicted RBP17.65■□□□□ 0.42
NCKIPSD-201ENST00000294129 TRIM14Q14142 442 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms