RNA–Protein interactions for RNA: ENST00000293826.4

TNFSF12-TNFSF13-201, Transcript of TNFSF12-TNFSF13 readthrough, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF12-TNFSF13, Length 1,816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13-201ENST00000293826 TMEM88BA6NKF7 163 aa27.23■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 LETM1O95202 739 aaPredicted RBP27.23■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 LRSAM1Q6UWE0 723 aa27.23■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 LBX2Q6XYB7 198 aa27.23■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 MRVI1Q9Y6F6 885 aa27.23■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 PDHXO00330 501 aa27.22■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 RILPL1Q5EBL4 403 aa27.22■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 PAGR1Q9BTK6 254 aa27.22■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 TXNRD2Q9NNW7 524 aa27.22■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 EDIL3O43854 480 aa27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 CNMDO75829 334 aa27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 FDX1P10109 184 aa27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 NONOQ15233 471 aaKnown RBP eCLIP27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 KRT25Q7Z3Z0 450 aa27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 TBCKQ8TEA7 893 aa27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 TRERF1Q96PN7 1200 aa27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 POLR3EQ9NVU0 708 aa27.21■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 NASPP49321 788 aaPredicted RBP27.2■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 ZNF174Q15697 407 aa27.2■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 LINC00301Q8NCQ3 95 aa27.2■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 R3HDMLQ9H3Y0 253 aa27.2■■□□□ 1.95
TNFSF12-TNFSF13-201ENST00000293826 FAM155AB1AL88 458 aaPredicted RBP27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 YEATS4O95619 227 aa27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 SLC10A3P09131 477 aa27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 XRCC6P12956 609 aaKnown RBP eCLIP27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 OSBPP22059 807 aa27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 PTPAQ15257 358 aa27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 TTC38Q5R3I4 469 aa27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 FCHSD1Q86WN1 690 aa27.2■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 LIG1P18858 919 aa27.19■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 GRM1Q13255 1194 aa27.19■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 ZIC5Q96T25 663 aa27.19■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 RNF146Q9NTX7 359 aa27.19■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 RBPJLQ9UBG7 517 aa27.19■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 NOL7Q9UMY1 257 aaKnown RBP27.19■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 MYH7BA7E2Y1 1941 aa27.19■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 MARCKSP29966 332 aaPredicted RBP27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 STAT3P40763 770 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 FSTL1Q12841 308 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 TRAF1Q13077 416 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 PABPC4Q13310 644 aaKnown RBP eCLIP27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 TEX13BQ9BXU2 312 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 ANO3Q9BYT9 981 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 ATP2A1O14983 1001 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 OAZ1P54368 228 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 STK38Q15208 465 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 COL20A1Q9P218 1284 aa27.18■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 GCOM1H8Y6P7 765 aaPredicted RBP27.17■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 POLR2MP0CAP2 368 aa27.17■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 MCM7P33993 719 aa27.17■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 LETM2Q2VYF4 491 aa27.17■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 Q3C1V9 767 aa27.17■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 ANKRD23Q86SG2 305 aa27.17■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 KCNG4Q8TDN1 519 aa27.17■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 RBBP6Q7Z6E9 1792 aaKnown RBP27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 PIK3CDO00329 1044 aa27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 CYP4F22Q6NT55 531 aa27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 SLC30A10Q6XR72 485 aa27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 PURBQ96QR8 312 aaKnown RBP27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 GLT8D2Q9H1C3 349 aa27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 IGF2BP3O00425 579 aaKnown RBP eCLIP27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 ME1P48163 572 aa27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 SLC39A14Q15043 492 aa27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 PAXIP1Q6ZW49 1069 aaPredicted RBP27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 SPATC1LQ9H0A9 340 aa27.16■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 TESPA1A2RU30 521 aaPredicted RBP27.15■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 SPTLC2O15270 562 aa27.15■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 HSD17B4P51659 736 aa27.15■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 NSMFQ6X4W1 530 aa27.15■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 NEK8Q86SG6 692 aa27.15■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 DDX19AQ9NUU7 478 aaKnown RBP27.15■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 TRAPPC10P48553 1259 aa27.14■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 UBXN2AP68543 259 aa27.14■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 MB21D1Q8N884 522 aa27.14■■□□□ 1.94
TNFSF12-TNFSF13-201ENST00000293826 SPDYE3A6NKU9 549 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 CCNT1O60563 726 aaKnown RBP27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 TDP2O95551 362 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 AP3B2Q13367 1082 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 SMCR8Q8TEV9 937 aaPredicted RBP27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 MOV10L1Q9BXT6 1211 aaKnown RBP27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 DACT1Q9NYF0 836 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 PNMA3Q9UL41 463 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 PCDHA7Q9UN72 937 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 RPS6P62753 249 aaKnown RBP27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 GRIN1Q05586 938 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 TSPY26PQ9H489 355 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 SLC45A1Q9Y2W3 748 aa27.13■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 ADALQ6DHV7 355 aa27.12■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 RIOX2Q8IUF8 465 aa27.12■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 CCAR1Q8IX12 1150 aaKnown RBP27.12■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 ZFP91Q96JP5 570 aaPredicted RBP27.12■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 CLIC6Q96NY7 704 aa27.12■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 TMEM60Q9H2L4 133 aa27.12■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 MANSC4A6NHS7 340 aaPredicted RBP27.11■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 PTGDRQ13258 359 aa27.11■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 BAATQ14032 418 aaPredicted RBP27.11■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 NCAPG2Q86XI2 1143 aa27.11■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 MCF2L2Q86YR7 1114 aa27.11■■□□□ 1.93
TNFSF12-TNFSF13-201ENST00000293826 ANKRD13CQ8N6S4 541 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms