RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CCDC85CA6NKD9 419 aa31.08■■■□□ 2.57
SSU72-201ENST00000291386 IFNAR1P17181 557 aa31.08■■■□□ 2.57
SSU72-201ENST00000291386 TBC1D5Q92609 795 aa31.08■■■□□ 2.57
SSU72-201ENST00000291386 UNC93B1Q9H1C4 597 aa31.08■■■□□ 2.57
SSU72-201ENST00000291386 HMX1Q9NP08 348 aaPredicted RBP31.08■■■□□ 2.57
SSU72-201ENST00000291386 PAK6Q9NQU5 681 aaPredicted RBP31.08■■■□□ 2.57
SSU72-201ENST00000291386 RBM27Q9P2N5 1060 aaKnown RBP31.08■■■□□ 2.57
SSU72-201ENST00000291386 V9GY48 417 aaPredicted RBP31.08■■■□□ 2.57
SSU72-201ENST00000291386 hCG_1984214I3L0E3 225 aa31.07■■■□□ 2.56
SSU72-201ENST00000291386 HSD17B4P51659 736 aa31.07■■■□□ 2.56
SSU72-201ENST00000291386 ZNF713Q8N859 430 aaPredicted RBP31.07■■■□□ 2.56
SSU72-201ENST00000291386 NCOA5Q9HCD5 579 aaKnown RBP31.07■■■□□ 2.56
SSU72-201ENST00000291386 ADD3Q9UEY8 706 aaKnown RBP31.07■■■□□ 2.56
SSU72-201ENST00000291386 ASTN1O14525 1302 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 ASB14A6NK59 587 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 PRPF3O43395 683 aaKnown RBP31.06■■■□□ 2.56
SSU72-201ENST00000291386 PFKFB2O60825 505 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 CYBAP13498 195 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 CALML3P27482 149 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 RABEP1Q15276 862 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 DNERQ8NFT8 737 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 TMEM106CQ9BVX2 250 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 RNF26Q9BY78 433 aaPredicted RBP31.06■■■□□ 2.56
SSU72-201ENST00000291386 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.06■■■□□ 2.566e-7■■■■□ 21.6
SSU72-201ENST00000291386 RNF208Q9H0X6 261 aa31.06■■■□□ 2.56
SSU72-201ENST00000291386 hCG_1642624A0A1W2PR95 340 aa31.05■■■□□ 2.56
SSU72-201ENST00000291386 SYTL5Q8TDW5 730 aaPredicted RBP31.05■■■□□ 2.56
SSU72-201ENST00000291386 MORC4Q8TE76 937 aa31.05■■■□□ 2.56
SSU72-201ENST00000291386 SLKQ9H2G2 1235 aaPredicted RBP31.05■■■□□ 2.56
SSU72-201ENST00000291386 SNAI1O95863 264 aaPredicted RBP31.04■■■□□ 2.56
SSU72-201ENST00000291386 CFBP00751 764 aa31.04■■■□□ 2.56
SSU72-201ENST00000291386 GJB1P08034 283 aa31.04■■■□□ 2.56
SSU72-201ENST00000291386 SCRN1Q12765 414 aa31.04■■■□□ 2.56
SSU72-201ENST00000291386 PURBQ96QR8 312 aaKnown RBP31.04■■■□□ 2.56
SSU72-201ENST00000291386 MCM3APO60318 1980 aa31.04■■■□□ 2.56
SSU72-201ENST00000291386 MYCP01106 439 aaPredicted RBP31.03■■■□□ 2.56
SSU72-201ENST00000291386 CAPN2P17655 700 aa31.03■■■□□ 2.56
SSU72-201ENST00000291386 ALDH5A1P51649 535 aaPredicted RBP31.03■■■□□ 2.56
SSU72-201ENST00000291386 STK3Q13188 491 aa31.03■■■□□ 2.56
SSU72-201ENST00000291386 PFKFB3Q16875 520 aaPredicted RBP31.03■■■□□ 2.56
SSU72-201ENST00000291386 ARMCX2Q7L311 632 aa31.03■■■□□ 2.56
SSU72-201ENST00000291386 TRPV1Q8NER1 839 aa31.03■■■□□ 2.56
SSU72-201ENST00000291386 CENPFP49454 3210 aa31.03■■■□□ 2.56
SSU72-201ENST00000291386 CCND3P30281 292 aaPredicted RBP31.02■■■□□ 2.56
SSU72-201ENST00000291386 ME3Q16798 604 aa31.02■■■□□ 2.56
SSU72-201ENST00000291386 WWC2Q6AWC2 1192 aa31.02■■■□□ 2.56
SSU72-201ENST00000291386 PPP1R18Q6NYC8 613 aa31.02■■■□□ 2.56
SSU72-201ENST00000291386 CPLX2Q6PUV4 134 aaKnown RBP31.02■■■□□ 2.56
SSU72-201ENST00000291386 TEX2Q8IWB9 1127 aa31.02■■■□□ 2.56
SSU72-201ENST00000291386 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.02■■■□□ 2.56
SSU72-201ENST00000291386 COL20A1Q9P218 1284 aa31.02■■■□□ 2.56
SSU72-201ENST00000291386 CNPY2Q9Y2B0 182 aa31.02■■■□□ 2.56
SSU72-201ENST00000291386 KIAA0100Q14667 2235 aaKnown RBP31.02■■■□□ 2.56
SSU72-201ENST00000291386 GCOM1H8Y6P7 765 aaPredicted RBP31.01■■■□□ 2.55
SSU72-201ENST00000291386 CPLX1O14810 134 aa31.01■■■□□ 2.55
SSU72-201ENST00000291386 POLR2MP0CAP2 368 aa31.01■■■□□ 2.55
SSU72-201ENST00000291386 PKN1Q16512 942 aa31.01■■■□□ 2.55
SSU72-201ENST00000291386 PHKBQ93100 1093 aa31.01■■■□□ 2.55
SSU72-201ENST00000291386 ABHD16BQ9H3Z7 469 aa31.01■■■□□ 2.55
SSU72-201ENST00000291386 BARHL2Q9NY43 387 aa31.01■■■□□ 2.55
SSU72-201ENST00000291386 PIK3CDO00329 1044 aa31■■■□□ 2.55
SSU72-201ENST00000291386 ZNF865P0CJ78 1059 aaPredicted RBP31■■■□□ 2.55
SSU72-201ENST00000291386 SCG2P13521 617 aa31■■■□□ 2.55
SSU72-201ENST00000291386 EDNRBP24530 442 aa31■■■□□ 2.55
SSU72-201ENST00000291386 GJA8P48165 433 aa31■■■□□ 2.55
SSU72-201ENST00000291386 HEATR3Q7Z4Q2 680 aa31■■■□□ 2.55
SSU72-201ENST00000291386 GPKOWQ92917 476 aaPredicted RBP eCLIP31■■■□□ 2.55
SSU72-201ENST00000291386 KATNBL1Q9H079 304 aa31■■■□□ 2.55
SSU72-201ENST00000291386 LIMCH1Q9UPQ0 1083 aa31■■■□□ 2.55
SSU72-201ENST00000291386 B4DLN1 442 aa30.99■■■□□ 2.55
SSU72-201ENST00000291386 MRPL12P52815 198 aaKnown RBP30.99■■■□□ 2.55
SSU72-201ENST00000291386 AKAP17AQ02040 695 aaKnown RBP30.99■■■□□ 2.55
SSU72-201ENST00000291386 PRAMEF19Q5SWL8 479 aa30.99■■■□□ 2.55
SSU72-201ENST00000291386 TAAR1Q96RJ0 339 aa30.99■■■□□ 2.55
SSU72-201ENST00000291386 MPHOSPH6Q99547 160 aaKnown RBP30.99■■■□□ 2.55
SSU72-201ENST00000291386 LRRC37A2A6NM11 1700 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 STXBP3O00186 592 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 SEPT4O43236 478 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 MSCO60682 206 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 CDKL5O76039 1030 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 LARGE1O95461 756 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 SGPL1O95470 568 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 TYW1BQ6NUM6 668 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 TRIM22Q8IYM9 498 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 NSUN6Q8TEA1 469 aaKnown RBP30.98■■■□□ 2.55
SSU72-201ENST00000291386 GTF3C6Q969F1 213 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 DEFB118Q96PH6 123 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 SLC26A6Q9BXS9 759 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 CRISPLD2Q9H0B8 497 aa30.98■■■□□ 2.55
SSU72-201ENST00000291386 POTEFA5A3E0 1075 aa30.97■■■□□ 2.55
SSU72-201ENST00000291386 MEIS2O14770 477 aa30.97■■■□□ 2.55
SSU72-201ENST00000291386 HOXA13P31271 388 aaPredicted RBP30.97■■■□□ 2.55
SSU72-201ENST00000291386 SSRP1Q08945 709 aaKnown RBP30.97■■■□□ 2.55
SSU72-201ENST00000291386 ACVR2BQ13705 512 aa30.97■■■□□ 2.55
SSU72-201ENST00000291386 NOL8Q76FK4 1167 aaKnown RBP30.97■■■□□ 2.55
SSU72-201ENST00000291386 U2AF1L4Q8WU68 220 aaKnown RBP30.97■■■□□ 2.55
SSU72-201ENST00000291386 IWS1Q96ST2 819 aa30.97■■■□□ 2.55
SSU72-201ENST00000291386 RMDN3Q96TC7 470 aa30.97■■■□□ 2.55
SSU72-201ENST00000291386 PSTPIP2Q9H939 334 aa30.97■■■□□ 2.55
SSU72-201ENST00000291386 DDX20Q9UHI6 824 aaKnown RBP30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms