RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 OFD1O75665 1012 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 SLC25A27O95847 323 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 BMP15O95972 392 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 HSD17B4P51659 736 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 ODF2Q5BJF6 829 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 RIOX2Q8IUF8 465 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 ASCC2Q9H1I8 757 aaPredicted RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 FBXO40Q9UH90 709 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 NOL7Q9UMY1 257 aaKnown RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 BRI3BPQ8WY22 251 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 TEX13BQ9BXU2 312 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 CPVLQ9H3G5 476 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 VAT1LQ9HCJ6 419 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 MORF4L1Q9UBU8 362 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 ELP1O95163 1332 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 LCTP09848 1927 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 PLXNB2O15031 1838 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 KIF28PB7ZC32 967 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 CNMDO75829 334 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 DGKZQ13574 1117 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 MOXD1Q6UVY6 613 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 REXO1Q8N1G1 1221 aaKnown RBP9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 ATG4CQ96DT6 458 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 POLR3EQ9NVU0 708 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 CFAP45Q9UL16 551 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 ZNF214Q9UL59 606 aaPredicted RBP9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 CCPG1Q9ULG6 757 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 TM4SF4P48230 202 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 HERVK_113P62684 666 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 CFHR5Q9BXR6 569 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 PSTPIP2Q9H939 334 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 KCNJ14Q9UNX9 436 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 DEKP35659 375 aaKnown RBP9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 NASPP49321 788 aaPredicted RBP9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 MYSM1Q5VVJ2 828 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 OTUD7BQ6GQQ9 843 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 FBXO28Q9NVF7 368 aa9.61□□□□□ -0.87
PTPDC1-201ENST00000288976 PFASO15067 1338 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 RPTORQ8N122 1335 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 CEBPZQ03701 1054 aaKnown RBP9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 CEP131Q9UPN4 1083 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 hCG_1642624A0A1W2PR95 340 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 BTBD19C9JJ37 291 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 PDHXO00330 501 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 CCDC174Q6PII3 467 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 CLEC4DQ8WXI8 215 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 SCAND2PQ9GZW5 306 aaPredicted RBP9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 RTEL1Q9NZ71 1219 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 GCOM1H8Y6P7 765 aaPredicted RBP9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 LAD1O00515 517 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 ALDH1A1P00352 501 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 POLR2MP0CAP2 368 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 ZNF76P36508 570 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 KRT85P78386 507 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 TMEM132BQ14DG7 1078 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 COA7Q96BR5 231 aa9.6□□□□□ -0.87
PTPDC1-201ENST00000288976 DDX11L8A8MPP1 907 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 YEATS4O95619 227 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 NONOQ15233 471 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 P2RX7Q99572 595 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 ACAD9Q9H845 621 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 OPLAHO14841 1288 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 BAG4O95429 457 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 CYP3A4P08684 503 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 XRRA1Q6P2D8 792 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 MROH8Q9H579 483 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 ABT1Q9ULW3 272 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 BTBD18B2RXH4 712 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 MEIS2O14770 477 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 GCFC2P16383 781 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 MSNP26038 577 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 CCNA1P78396 465 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 NOGQ13253 232 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 IFNL1Q8IU54 200 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 OXER1Q8TDS5 423 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 SYAP1Q96A49 352 aaPredicted RBP9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 CDK5RAP3Q96JB5 506 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 TRERF1Q96PN7 1200 aa9.59□□□□□ -0.87
PTPDC1-201ENST00000288976 CCDC194A0A1B0GVG4 234 aa9.59□□□□□ -0.88
PTPDC1-201ENST00000288976 USP11P51784 963 aa9.59□□□□□ -0.88
PTPDC1-201ENST00000288976 GUCY1B3Q02153 619 aa9.59□□□□□ -0.88
PTPDC1-201ENST00000288976 SNRNP48Q6IEG0 339 aaKnown RBP9.59□□□□□ -0.88
PTPDC1-201ENST00000288976 RAVER2Q9HCJ3 691 aaKnown RBP9.59□□□□□ -0.88
PTPDC1-201ENST00000288976 CYP3A7-CYP3A51PA0A087WV96 503 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 CYP3A7P24462 503 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 SREBF1P36956 1147 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 STAT3P40763 770 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 ABRAQ8N0Z2 381 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 CRYGNQ8WXF5 182 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 SPATC1LQ9H0A9 340 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 MGAMO43451 1857 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 GOLGA6L19H0YKK7 550 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 PPFIA3O75145 1194 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 PPP6R2O75170 966 aa9.58□□□□□ -0.88
PTPDC1-201ENST00000288976 FAM110CQ1W6H9 321 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms