RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 DDB1Q16531 1140 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 CCDC96Q2M329 555 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 SELENOOQ9BVL4 669 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 CPVLQ9H3G5 476 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 MAGEF1Q9HAY2 307 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 MKNK2Q9HBH9 465 aa14.77□□□□□ -0.05
SLC28A1-201ENST00000286749 CCNT1O60563 726 aaKnown RBP14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 GGCXP38435 758 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 LETM2Q2VYF4 491 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 GALNT17Q6IS24 598 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 CLEC4GQ6UXB4 293 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 CCNI2Q6ZMN8 369 aaPredicted RBP14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 ANKS1AQ92625 1134 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 CCDC42Q96M95 316 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 ERGIC2Q96RQ1 377 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 CRACR2AQ9BSW2 395 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 MKRN1Q9UHC7 482 aaKnown RBP14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 COL16A1Q07092 1604 aaPredicted RBP14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 TSPY3P0CV98 308 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 TSPY8P0CW00 308 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 RPS8P62241 208 aaKnown RBP14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 SPA17Q15506 151 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 FKBP15Q5T1M5 1219 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 TXNRD3Q86VQ6 643 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 ZSCAN29Q8IWY8 852 aaPredicted RBP14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 SLC44A5Q8NCS7 719 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 DRC1Q96MC2 740 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 C7orf25Q9BPX7 421 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 RSPH14Q9UHP6 348 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 STX8Q9UNK0 236 aa14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
SLC28A1-201ENST00000286749 A0A1W2PQJ5 194 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 GPIHBP1Q8IV16 184 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 CERKQ8TCT0 537 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 AK8Q96MA6 479 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 TSGA10Q9BZW7 698 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 MLXIPQ9HAP2 919 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 CAPN6Q9Y6Q1 641 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 NAV1Q8NEY1 1877 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 TECP42680 631 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 NAPAP54920 295 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 CDK17Q00537 523 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 FIGNQ5HY92 759 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 IQCEQ6IPM2 695 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 SMIM5Q71RC9 77 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 MARCH10Q8NA82 808 aaPredicted RBP14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 KIAA0895Q8NCT3 520 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 SH3RF3Q8TEJ3 882 aaPredicted RBP14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 SEMA6BQ9H3T3 888 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 SNX12Q9UMY4 172 aa14.75□□□□□ -0.05
SLC28A1-201ENST00000286749 EPHB6O15197 1021 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 EZH2Q15910 746 aaKnown RBP14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 C2CD5Q86YS7 1000 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 CREG2Q8IUH2 290 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 FNBP4Q8N3X1 1017 aaPredicted RBP14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 SMARCC1Q92922 1105 aaPredicted RBP14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 TMEM47Q9BQJ4 181 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 IFIH1Q9BYX4 1025 aaKnown RBP14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 SLC39A2Q9NP94 309 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 PALM3A6NDB9 673 aaPredicted RBP14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 AGPSO00116 658 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 CCDC24Q8N4L8 307 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 FAM207AQ9NSI2 230 aaPredicted RBP14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 ARHGAP20Q9P2F6 1191 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 JRKLQ9Y4A0 524 aa14.74□□□□□ -0.05
SLC28A1-201ENST00000286749 KLRF2D3W0D1 207 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 TACC1O75410 805 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 MOCS3O95396 460 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 NONOQ15233 471 aaKnown RBP eCLIP14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 TBC1D9BQ66K14 1250 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 CNNM4Q6P4Q7 775 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 KRT25Q7Z3Z0 450 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 TRIM58Q8NG06 486 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 HDAC7Q8WUI4 952 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 MMTAG2Q9BU76 263 aaKnown RBP14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 ZMYND12Q9H0C1 365 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 SH2D4AQ9H788 454 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 PCDHA13Q9Y5I0 950 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 USO1O60763 962 aaKnown RBP14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 EIF4A3P38919 411 aaKnown RBP14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 KIF11P52732 1056 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 KCNQ4P56696 695 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 CCDC70Q6NSX1 233 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 AENQ8WTP8 325 aaKnown RBP14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 ANKRD2Q9GZV1 360 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 FAM184BQ9ULE4 1060 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 PLAGL2Q9UPG8 496 aa14.73□□□□□ -0.05
SLC28A1-201ENST00000286749 ROBO3Q96MS0 1386 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 GOLGA6BA6NDN3 693 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 SMCO2A6NFE2 343 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 PPP1R2P41236 205 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 MRPS25P82663 173 aaKnown RBP14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 AMPD3Q01432 767 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 VWA3BQ502W6 1294 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 SPTY2D1Q68D10 685 aaPredicted RBP14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 NEK8Q86SG6 692 aa14.72□□□□□ -0.05
SLC28A1-201ENST00000286749 MMGT1Q8N4V1 131 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms