RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 SPATA1Q5VX52 437 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 CACNA2D4Q7Z3S7 1137 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 DHX36Q9H2U1 1008 aaKnown RBP10.44□□□□□ -0.74
CSF1R-201ENST00000286301 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 ABCA3Q99758 1704 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 PLCH1Q4KWH8 1693 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 MEIS1O00470 390 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 TEX33O43247 280 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 ACTN4O43707 911 aaKnown RBP10.44□□□□□ -0.74
CSF1R-201ENST00000286301 STRIP1Q5VSL9 837 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 GALNT17Q6IS24 598 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 SARM1Q6SZW1 724 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 CCDC102AQ96A19 550 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 FEZ2Q9UHY8 353 aaPredicted RBP10.44□□□□□ -0.74
CSF1R-201ENST00000286301 MYH3P11055 1940 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 PNMA6FA0A0J9YX94 578 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 PALM3A6NDB9 673 aaPredicted RBP10.44□□□□□ -0.74
CSF1R-201ENST00000286301 TBC1D8BQ0IIM8 1120 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 FUT2Q10981 343 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 QRICH1Q2TAL8 776 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
CSF1R-201ENST00000286301 RGS22Q8NE09 1264 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 TSG101Q99816 390 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 IMPACTQ9P2X3 320 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 TUBE1Q9UJT0 475 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 MYO5AQ9Y4I1 1855 aaKnown RBP10.44□□□□□ -0.74
CSF1R-201ENST00000286301 CRYBG1Q9Y4K1 1723 aa10.44□□□□□ -0.74
CSF1R-201ENST00000286301 TRAF5O00463 557 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
CSF1R-201ENST00000286301 CASQ1P31415 396 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 KRT9P35527 623 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 SPAG1Q07617 926 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 E2F4Q16254 413 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 TDRD12Q587J7 1177 aaKnown RBP10.43□□□□□ -0.74
CSF1R-201ENST00000286301 TRIML1Q8N9V2 468 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 KIAA1024Q9UPX6 916 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 KCNJ18B7U540 433 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 BMP3P12645 472 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 KCNJ12Q14500 433 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 WDR78Q5VTH9 848 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 APOBEC3HQ6NTF7 200 aaKnown RBP10.43□□□□□ -0.74
CSF1R-201ENST00000286301 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
CSF1R-201ENST00000286301 PDS5AQ29RF7 1337 aaKnown RBP10.43□□□□□ -0.74
CSF1R-201ENST00000286301 GLI3P10071 1580 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 ZBTB5O15062 677 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 RGL2O15211 777 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 DPEP1P16444 411 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 ZNF543Q08ER8 600 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 ENOX1Q8TC92 643 aaKnown RBP10.43□□□□□ -0.74
CSF1R-201ENST00000286301 NOC4LQ9BVI4 516 aaKnown RBP10.43□□□□□ -0.74
CSF1R-201ENST00000286301 SPZ1Q9BXG8 430 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 AMNQ9BXJ7 453 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 SH3GLB2Q9NR46 395 aa10.43□□□□□ -0.74
CSF1R-201ENST00000286301 PLSCR1O15162 318 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 CTIFO43310 598 aaKnown RBP10.42□□□□□ -0.74
CSF1R-201ENST00000286301 PRCPP42785 496 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.42□□□□□ -0.74
CSF1R-201ENST00000286301 PSMD14O00487 310 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 KIF5CO60282 957 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 CASP14P31944 242 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 ARL6IP4Q66PJ3 421 aaKnown RBP10.42□□□□□ -0.74
CSF1R-201ENST00000286301 ARMCX5Q6P1M9 558 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 NSMFQ6X4W1 530 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 JMJD4Q9H9V9 463 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 MORC2Q9Y6X9 1032 aaPredicted RBP10.42□□□□□ -0.74
CSF1R-201ENST00000286301 ONECUT3O60422 494 aaPredicted RBP10.42□□□□□ -0.74
CSF1R-201ENST00000286301 SORBS3O60504 671 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
CSF1R-201ENST00000286301 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 PRAMEF18Q5VWM3 479 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 HHIPL2Q6UWX4 724 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 ERMNQ8TAM6 284 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 CAGE1Q8TC20 777 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 TMEM39BQ9GZU3 492 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 LUC7L2Q9Y383 392 aaKnown RBP10.42□□□□□ -0.74
CSF1R-201ENST00000286301 SPEF2Q9C093 1822 aa10.42□□□□□ -0.74
CSF1R-201ENST00000286301 TBCAO75347 108 aaKnown RBP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 CDC25BP30305 580 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 PABPC4Q13310 644 aaKnown RBP eCLIP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 TBC1D10BQ4KMP7 808 aaPredicted RBP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 TMEM179Q6ZVK1 233 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 GUCA1BQ9UMX6 200 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 AKAP11Q9UKA4 1901 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 PSDA5PKW4 1024 aaPredicted RBP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 PHACTR2O75167 634 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 SEC31AO94979 1220 aaKnown RBP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 CCDC175P0C221 793 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 ALAS1P13196 640 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 BMP6P22004 513 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 SHMT1P34896 483 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 STAT3P40763 770 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 TMED8Q6PL24 325 aaPredicted RBP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 VSTM4Q8IW00 320 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 LARP4BQ92615 738 aaKnown RBP10.41□□□□□ -0.74
CSF1R-201ENST00000286301 SHISA4Q96DD7 197 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 CARD6Q9BX69 1037 aa10.41□□□□□ -0.74
CSF1R-201ENST00000286301 FAM207AQ9NSI2 230 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms