RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 VDRP11473 427 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 SDSP20132 328 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 PRKG1Q13976 671 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 LRCH2Q5VUJ6 765 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CWF19L1Q69YN2 538 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 ZNF513Q8N8E2 541 aaPredicted RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 NOL10Q9BSC4 688 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 ZFAND3Q9H8U3 227 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 IFT122Q9HBG6 1241 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 UNC13BO14795 1591 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CFAP69A5D8W1 941 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CAPN5O15484 640 aaPredicted RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 MAN1A2O60476 641 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CILPO75339 1184 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 TBX2Q13207 712 aaPredicted RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 PPP2R5DQ14738 602 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 DPY19L1Q2PZI1 675 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 NXNQ6DKJ4 435 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 ERAP2Q6P179 960 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 ELMSAN1Q6PJG2 1045 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 POF1BQ8WVV4 589 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 PTPRN2Q92932 1015 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CAMKK2Q96RR4 588 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 SLC9A7Q96T83 725 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 AP1M1Q9BXS5 423 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 PBX4Q9BYU1 374 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 MROH1Q8NDA8 1641 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 SMTNL1A8MU46 457 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 ATICP31939 592 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 ELF1P32519 619 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 DGKGP49619 791 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 HFE2Q6ZVN8 426 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 RAB44Q7Z6P3 723 aaPredicted RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 DAAM2Q86T65 1068 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 C12orf40Q86WS4 652 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 IGSF22Q8N9C0 903 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 WHRNQ9P202 907 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 PDZRN3Q9UPQ7 1066 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 DNMT1P26358 1616 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 ZC3H13Q5T200 1668 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 KCNQ2O43526 872 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 H2AFYO75367 372 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 PAGE1O75459 146 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 RPLP2P05387 115 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 GRM5P41594 1212 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 KIF23Q02241 960 aaPredicted RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 UAP1L1Q3KQV9 507 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 LCA5Q86VQ0 697 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 IQCA1Q86XH1 822 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 DDX1Q92499 740 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 MUL1Q969V5 352 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.2□□□□□ -1.9
CHD1-201ENST00000284049 BRD9Q9H8M2 597 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 LRFN1Q9P244 771 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 TNPO3Q9Y5L0 923 aaKnown RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 ARHGAP31Q2M1Z3 1444 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CDC42BPBQ9Y5S2 1711 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 GCC2Q8IWJ2 1684 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CYP11A1P05108 521 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 PEX2P28328 305 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CCNG2Q16589 344 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 SKOR2Q2VWA4 1001 aaPredicted RBP3.2□□□□□ -1.9
CHD1-201ENST00000284049 CIAPIN1Q6FI81 312 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 CYP4X1Q8N118 509 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 NAT16Q8N8M0 369 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 RHOBTB2Q9BYZ6 727 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 GMIPQ9P107 970 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 LRRC9Q6ZRR7 1453 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 TEX14Q8IWB6 1497 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 SSU72P8A0A1W2PR75 194 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 H7C1D1 291 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 DDX3YO15523 660 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 SNX2O60749 519 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ACPPP15309 386 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 CTNNA1P35221 906 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 PAK1Q13153 545 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 NBPF9Q3BBW0 867 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 SPECC1Q5M775 1068 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PEAR1Q5VY43 1037 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 RINLQ6ZS11 566 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 FBXO41Q8TF61 875 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PLPPR2Q96GM1 343 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 FUBP3Q96I24 572 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD1-201ENST00000284049 SDF4Q9BRK5 362 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 LRRC27Q9C0I9 530 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 CHST12Q9NRB3 414 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ENAMQ9NRM1 1142 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 BTG4Q9NY30 223 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 TLR7Q9NYK1 1049 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD1-201ENST00000284049 PRDM15P57071 1507 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 M0R2C6 588 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ITGAVP06756 1048 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ITPKAP23677 461 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 POLR2BP30876 1174 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 PLIN5Q00G26 463 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 TIGD6Q17RP2 521 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ITPRIPL1Q6GPH6 555 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ZCCHC8Q6NZY4 707 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 ANKLE1Q8NAG6 615 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms