RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CNKSR1Q969H4 720 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 CCDC47Q96A33 483 aaKnown RBP6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 KIFC2Q96AC6 838 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 RMND1Q9NWS8 449 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 TFR2Q9UP52 801 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 YDJCA8MPS7 323 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 B4DLN1 442 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 ZBTB5O15062 677 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 CFBP00751 764 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 KRT9P35527 623 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 MRPL12P52815 198 aaKnown RBP6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 POTEAQ6S8J7 498 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 GLIS3Q8NEA6 775 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 ACRBPQ8NEB7 543 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 SPATA20Q8TB22 786 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 TMEM39BQ9GZU3 492 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 EPC1Q9H2F5 836 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 RIOX1Q9H6W3 641 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 PAXBP1Q9Y5B6 917 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 RNF225M0QZC1 329 aaPredicted RBP6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 M0R2N6 131 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 PSMD14O00487 310 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 NKRFO15226 690 aaKnown RBP eCLIP6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 NDUFB10O96000 172 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 KLK7P49862 253 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 COPB1P53618 953 aaKnown RBP6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 TERF1P54274 439 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 NR1I3Q14994 352 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 DLGAP5Q15398 846 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 ERCC6LQ2NKX8 1250 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 GALNT17Q6IS24 598 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 SV2BQ7L1I2 683 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 KCNK18Q7Z418 384 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 RGS22Q8NE09 1264 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 MNS1Q8NEH6 495 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 ACER1Q8TDN7 264 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 SLF1Q9BQI6 1058 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 ADD3Q9UEY8 706 aaKnown RBP6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 SWAP70Q9UH65 585 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 PCDHA12Q9UN75 941 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 CCDC88AQ3V6T2 1871 aa6.78□□□□□ -1.32
TNFSF4-201ENST00000281834 NPHP3-ACAD11A0A0J9YXS1 232 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 SHTN1A0MZ66 631 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 ARHGAP6O43182 974 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TRIM21P19474 475 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 NCBP1Q09161 790 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 NCAPH2Q6IBW4 605 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 ZDHHC15Q96MV8 337 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 WDR24Q96S15 920 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TRIM9Q9C026 710 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 HOMER2Q9NSB8 354 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 KIAA1024Q9UPX6 916 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 ECM29Q5VYK3 1845 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TAF1LQ8IZX4 1826 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 POTEB3A0JP26 581 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 POTECB2RU33 542 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 E9PMD0 336 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 ZSCAN12O43309 604 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TFRCP02786 760 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 RRP1BQ14684 758 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 ARHGAP29Q52LW3 1261 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TCP11X2Q5H9J9 407 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 GPATCH4Q5T3I0 446 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 POTEBQ6S5H4 581 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 CYP2W1Q8TAV3 490 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 LARP4BQ92615 738 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 FEZ1Q99689 392 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 MMTAG2Q9BU76 263 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 RNF216Q9NWF9 866 aaPredicted RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 A0A1W2PRG0 241 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 MYMKA6NI61 221 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 SPDYE3A6NKU9 549 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 IGSF3O75054 1194 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 DPEP1P16444 411 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 ETF1P62495 437 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 DGKZQ13574 1117 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TSR1Q2NL82 804 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 FAM83BQ5T0W9 1011 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TMED8Q6PL24 325 aaPredicted RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 RAD9BQ6WBX8 426 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 CPXCR1Q8N123 301 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TTLL6Q8N841 843 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 NOC3LQ8WTT2 800 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 TBC1D5Q92609 795 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 CTAGE1Q96RT6 745 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 CARD6Q9BX69 1037 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 RAB34Q9BZG1 259 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 PDCL3Q9H2J4 239 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 MRPL44Q9H9J2 332 aaKnown RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 FAM207AQ9NSI2 230 aaPredicted RBP6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 FBXO28Q9NVF7 368 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 RWDD2AQ9UIY3 292 aa6.77□□□□□ -1.33
TNFSF4-201ENST00000281834 DDX39AO00148 427 aaKnown RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 GYPCP04921 128 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 TBC1D8BQ0IIM8 1120 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 GRB10Q13322 594 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 ECM1Q16610 540 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms