RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 ZNF213O14771 459 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 CYP2C18P33260 490 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 ITGA7Q13683 1181 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 USH1GQ495M9 461 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 TMEM63BQ5T3F8 832 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
CD44-203ENST00000278386 RNF207Q6ZRF8 634 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 PLEKHM2Q8IWE5 1019 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 TTC14Q96N46 770 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 MPHOSPH6Q99547 160 aaKnown RBP14.98□□□□□ -0.01
CD44-203ENST00000278386 HIPK3Q9H422 1215 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 PNMA2Q9UL42 364 aa14.98□□□□□ -0.01
CD44-203ENST00000278386 WDR19Q8NEZ3 1342 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 SCN5AQ14524 2016 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 SCN10AQ9Y5Y9 1956 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 CD4P01730 458 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 GOLGA8HP0CJ92 632 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 ACRP10323 421 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 PSMC6P62333 389 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 PDE4DQ08499 809 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 DUSP28Q4G0W2 176 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 TMEM240Q5SV17 173 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 GPATCH4Q5T3I0 446 aaKnown RBP14.97□□□□□ -0.01
CD44-203ENST00000278386 IQCA1Q86XH1 822 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 OR6J1Q8NGC5 347 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 MORC4Q8TE76 937 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 WDR11Q9BZH6 1224 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 Q9Y3F1 56 aa14.97□□□□□ -0.01
CD44-203ENST00000278386 LOC102724159A0A0B4J2E5 919 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 A0A0C4DFX4 3053 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 HIP1O00291 1037 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 KDM4AO75164 1064 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 MYL3P08590 195 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 SNHG28P0DPA3 235 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 RPS6P62753 249 aaKnown RBP14.96□□□□□ -0.01
CD44-203ENST00000278386 NUCB1Q02818 461 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 MYO9BQ13459 2157 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 PPP2R5BQ15173 497 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 PWP2Q15269 919 aaKnown RBP14.96□□□□□ -0.01
CD44-203ENST00000278386 ZNF365Q70YC5 407 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 SLC43A3Q8NBI5 491 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 PNMA1Q8ND90 353 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 EXOC6Q8TAG9 804 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 CLEC4DQ8WXI8 215 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 TIFAQ96CG3 184 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 MTIF3Q9H2K0 278 aaKnown RBP14.96□□□□□ -0.01
CD44-203ENST00000278386 OSBPL3Q9H4L5 887 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 KAT14Q9H8E8 782 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 POLR3EQ9NVU0 708 aa14.96□□□□□ -0.01
CD44-203ENST00000278386 UMODL1Q5DID0 1318 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 RAD50Q92878 1312 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 B4E1Z4 1266 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 DHX16O60231 1041 aaKnown RBP14.95□□□□□ -0.02
CD44-203ENST00000278386 B4GALT4O60513 344 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 IGHDP01880 384 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 CPT1AP50416 773 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 CCL23P55773 120 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 CDC37Q16543 378 aaPredicted RBP14.95□□□□□ -0.02
CD44-203ENST00000278386 CCDC178Q5BJE1 867 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 SEZ6LQ9BYH1 1024 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 TRPV6Q9H1D0 765 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 CPVLQ9H3G5 476 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 IL23AQ9NPF7 189 aa14.95□□□□□ -0.02
CD44-203ENST00000278386 GPHNQ9NQX3 736 aaPredicted RBP14.95□□□□□ -0.02
CD44-203ENST00000278386 GRIN2DO15399 1336 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 GRXCR1A8MXD5 290 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 B4DLN1 442 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 NT5C2P49902 561 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 MRPL12P52815 198 aaKnown RBP14.94□□□□□ -0.02
CD44-203ENST00000278386 IMMTQ16891 758 aaKnown RBP14.94□□□□□ -0.02
CD44-203ENST00000278386 BRDTQ58F21 947 aaPredicted RBP14.94□□□□□ -0.02
CD44-203ENST00000278386 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 C16orf59Q7L2K0 433 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 DGKHQ86XP1 1220 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 DNERQ8NFT8 737 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 NOC4LQ9BVI4 516 aaKnown RBP14.94□□□□□ -0.02
CD44-203ENST00000278386 PBX4Q9BYU1 374 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 UBA5Q9GZZ9 404 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 ZNF576Q9H609 170 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 CUL9Q8IWT3 2517 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 MYH7BA7E2Y1 1941 aa14.94□□□□□ -0.02
CD44-203ENST00000278386 TNKSO95271 1327 aa14.93□□□□□ -0.02
CD44-203ENST00000278386 NKRFO15226 690 aaKnown RBP eCLIP14.93□□□□□ -0.02
CD44-203ENST00000278386 PBX2P40425 430 aa14.93□□□□□ -0.02
CD44-203ENST00000278386 PURAQ00577 322 aaKnown RBP14.93□□□□□ -0.02
CD44-203ENST00000278386 GRIN2CQ14957 1233 aa14.93□□□□□ -0.02
CD44-203ENST00000278386 SCFD2Q8WU76 684 aa14.93□□□□□ -0.02
CD44-203ENST00000278386 ZSCAN10Q96SZ4 725 aaPredicted RBP14.93□□□□□ -0.02
CD44-203ENST00000278386 DSCC1Q9BVC3 393 aa14.93□□□□□ -0.02
CD44-203ENST00000278386 COL25A1Q9BXS0 654 aaPredicted RBP14.93□□□□□ -0.02
CD44-203ENST00000278386 ALDH8A1Q9H2A2 487 aaPredicted RBP14.93□□□□□ -0.02
CD44-203ENST00000278386 PRUNE2Q8WUY3 3088 aa14.93□□□□□ -0.02
CD44-203ENST00000278386 ABCB11O95342 1321 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 RBM47A0AV96 593 aaKnown RBP14.92□□□□□ -0.02
CD44-203ENST00000278386 FGBP02675 491 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 ASPRV1Q53RT3 343 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 RASIP1Q5U651 963 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 OTOP2Q7RTS6 562 aa14.92□□□□□ -0.02
CD44-203ENST00000278386 ENAHQ8N8S7 591 aaPredicted RBP14.92□□□□□ -0.02
CD44-203ENST00000278386 HERVK_113Q902F9 699 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms