RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MIGA2Q7L4E1 593 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 LRRC15Q8TF66 581 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 NAP1L4Q99733 375 aaKnown RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 MMTAG2Q9BU76 263 aaKnown RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 MAGEF1Q9HAY2 307 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 SAMSN1Q9NSI8 373 aaKnown RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 ZBTB21Q9ULJ3 1066 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 FER1L6Q2WGJ9 1857 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 SHTN1A0MZ66 631 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 MEIS2O14770 477 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 GCFC2P16383 781 aaKnown RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 PLCG1P19174 1290 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 CAP2P40123 477 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 SEMA3FQ13275 785 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 KCNB1Q14721 858 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 MCTP2Q6DN12 878 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 KLHL10Q6JEL2 608 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 SMYD4Q8IYR2 804 aaPredicted RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 GOPCQ9HD26 462 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 LRWD1Q9UFC0 647 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 PRR12Q9ULL5 1215 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 BCS1LQ9Y276 419 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 CYP3A7-CYP3A51PA0A087WV96 503 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 KLRC4O43908 158 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 CYP3A7P24462 503 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 RPS12P25398 132 aaKnown RBP10.8□□□□□ -0.68
TRIM55-201ENST00000276573 STX17P56962 302 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 DHX8Q14562 1220 aaKnown RBP10.8□□□□□ -0.68
TRIM55-201ENST00000276573 TMEM266Q2M3C6 531 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 SPICE1Q8N0Z3 855 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 CALML4Q96GE6 196 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 DDX25Q9UHL0 483 aaKnown RBP10.8□□□□□ -0.68
TRIM55-201ENST00000276573 LTBP3Q9NS15 1303 aa10.8□□□□□ -0.68
TRIM55-201ENST00000276573 CCZ1BP86790 482 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 CCZ1P86791 482 aaPredicted RBP10.79□□□□□ -0.68
TRIM55-201ENST00000276573 AP3B2Q13367 1082 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 RASA3Q14644 834 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 KMT5BQ4FZB7 885 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 HSP90AA4PQ58FG1 418 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 VSTM4Q8IW00 320 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 HAS1Q92839 578 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 C7orf25Q9BPX7 421 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 ANO3Q9BYT9 981 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 RAB34Q9BZG1 259 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 PLA2G6O60733 806 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 FOSP01100 380 aaPredicted RBP10.79□□□□□ -0.68
TRIM55-201ENST00000276573 SKILP12757 684 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 PRCPP42785 496 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 STAT2P52630 851 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 AMPD3Q01432 767 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 GRB10Q13322 594 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 NR1I3Q14994 352 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 USH1GQ495M9 461 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 CDKAL1Q5VV42 579 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 ARMCX5Q6P1M9 558 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 CHURC1Q8WUH1 139 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 MBOAT7Q96N66 472 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 PNMA5Q96PV4 448 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 INTS13Q9NVM9 706 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 RWDD2AQ9UIY3 292 aa10.79□□□□□ -0.68
TRIM55-201ENST00000276573 SYNRGQ9UMZ2 1314 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 BRCA1P38398 1863 aaKnown RBP10.78□□□□□ -0.68
TRIM55-201ENST00000276573 FZD9O00144 591 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 MARCH6O60337 910 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 RHOBTB3O94955 611 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 TRAF1Q13077 416 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 DNTTIP2Q5QJE6 756 aaKnown RBP10.78□□□□□ -0.68
TRIM55-201ENST00000276573 FAM83BQ5T0W9 1011 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 MOXD1Q6UVY6 613 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 CCDC150Q8NCX0 1101 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 CRYGNQ8WXF5 182 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 TEPSINQ96N21 525 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 P2RX7Q99572 595 aaKnown RBP10.78□□□□□ -0.68
TRIM55-201ENST00000276573 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 BLOC1S4Q9NUP1 217 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 STK17AQ9UEE5 414 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 PCDHA12Q9UN75 941 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 CTNND2Q9UQB3 1225 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 GDAQ9Y2T3 454 aa10.78□□□□□ -0.68
TRIM55-201ENST00000276573 R3HCC1Q9Y3T6 440 aaKnown RBP10.78□□□□□ -0.68
TRIM55-201ENST00000276573 PHF20L1A8MW92 1017 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 OPLAHO14841 1288 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 EGFRP00533 1210 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 ASNSP08243 561 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 GMPSP49915 693 aaPredicted RBP10.77□□□□□ -0.68
TRIM55-201ENST00000276573 PRELPP51888 382 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 PAK1Q13153 545 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 KRT79Q5XKE5 535 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 SV2BQ7L1I2 683 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.68
TRIM55-201ENST00000276573 ADSSL1Q8N142 457 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 NELFBQ8WX92 580 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 NUDT12Q9BQG2 462 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 TRIM9Q9C026 710 aa10.77□□□□□ -0.68
TRIM55-201ENST00000276573 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.77□□□□□ -0.68
TRIM55-201ENST00000276573 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms