RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 BICDL1Q6ZP65 573 aa10.16□□□□□ -0.78
PDGFC-201ENST00000274071 EXOC3L1Q86VI1 746 aa10.16□□□□□ -0.78
PDGFC-201ENST00000274071 USHBP1Q8N6Y0 703 aa10.16□□□□□ -0.78
PDGFC-201ENST00000274071 ZBTB8BQ8NAP8 495 aaPredicted RBP10.16□□□□□ -0.78
PDGFC-201ENST00000274071 SMCR8Q8TEV9 937 aaPredicted RBP10.16□□□□□ -0.78
PDGFC-201ENST00000274071 NEK1Q96PY6 1258 aa10.16□□□□□ -0.78
PDGFC-201ENST00000274071 ORAI2Q96SN7 254 aa10.16□□□□□ -0.78
PDGFC-201ENST00000274071 PCDH18Q9HCL0 1135 aa10.16□□□□□ -0.78
PDGFC-201ENST00000274071 ADD3Q9UEY8 706 aaKnown RBP10.16□□□□□ -0.78
PDGFC-201ENST00000274071 CNOT8Q9UFF9 292 aaKnown RBP10.16□□□□□ -0.78
PDGFC-201ENST00000274071 ORC4O43929 436 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 KRT16P08779 473 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 GNAZP19086 355 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 TNFRSF8P28908 595 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 CARSP49589 748 aaKnown RBP10.15□□□□□ -0.78
PDGFC-201ENST00000274071 PLOD1Q02809 727 aaPredicted RBP10.15□□□□□ -0.78
PDGFC-201ENST00000274071 KIAA0753Q2KHM9 967 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 HAUS3Q68CZ6 603 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 CHADLQ6NUI6 762 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 SAPCD2Q86UD0 394 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 PROSER2Q86WR7 435 aaPredicted RBP10.15□□□□□ -0.78
PDGFC-201ENST00000274071 NFU1Q9UMS0 254 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 OVOS2A0A0G2JMS6 1433 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 IGF2BP3O00425 579 aaKnown RBP eCLIP10.15□□□□□ -0.78
PDGFC-201ENST00000274071 TMCC1O94876 653 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 CDC25AP30304 524 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 TMED1Q13445 227 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 SHC4Q6S5L8 630 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 PI16Q6UXB8 463 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 GBP7Q8N8V2 638 aaPredicted RBP10.15□□□□□ -0.78
PDGFC-201ENST00000274071 ANKS4BQ8N8V4 417 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.15□□□□□ -0.78
PDGFC-201ENST00000274071 NACA2Q9H009 215 aa10.15□□□□□ -0.78
PDGFC-201ENST00000274071 PAIP2BQ9ULR5 123 aaKnown RBP10.15□□□□□ -0.78
PDGFC-201ENST00000274071 USP42Q9H9J4 1324 aaKnown RBP10.15□□□□□ -0.79
PDGFC-201ENST00000274071 CEP104O60308 925 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 IDEP14735 1019 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 ITIH3Q06033 890 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF827Q17R98 1081 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 SLC4A8Q2Y0W8 1093 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 PPP1R42Q7Z4L9 355 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 MREGQ8N565 214 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 VCXQ9H320 206 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 NCOA5Q9HCD5 579 aaKnown RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 HMG20BQ9P0W2 317 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 NKX1-2Q9UD57 310 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 MAN1B1Q9UKM7 699 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 STK38LQ9Y2H1 464 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 SALL1Q9NSC2 1324 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 USO1O60763 962 aaKnown RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 CCDC166P0CW27 439 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 RARAP10276 462 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 ALOX15P16050 662 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 VCAM1P19320 739 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 MSH2P43246 934 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 GUCY2FP51841 1108 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 NCALDP61601 193 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 TSNAXIP1Q2TAA8 658 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 ANO1Q5XXA6 986 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 TRPM8Q7Z2W7 1104 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 SMC1BQ8NDV3 1235 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 ANKRD24Q8TF21 1146 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 EVI5LQ96CN4 794 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 CHMP6Q96FZ7 201 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 NLRP2Q9NX02 1062 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 PLAAQ9Y263 795 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 USP54Q70EL1 1684 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 CRB1P82279 1406 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 A0A0D9SFI3 127 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 GLI1P08151 1106 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 ADCY1Q08828 1119 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 OLFML1Q6UWY5 402 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 NCCRP1Q6ZVX7 275 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 HOOK3Q86VS8 718 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 SESTD1Q86VW0 696 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 SLC15A3Q8IY34 581 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 KIF2BQ8N4N8 673 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 OXCT2Q9BYC2 517 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-201ENST00000274071 SNRKQ9NRH2 765 aa10.14□□□□□ -0.79
PDGFC-201ENST00000274071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ESYT3A0FGR9 886 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ANO9A1A5B4 782 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 HIP1RO75146 1068 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 FDPSP14324 419 aaKnown RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 HERVK_113P62684 666 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 PPP2R2AP63151 447 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ATP11AP98196 1134 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 CCDC92Q53HC0 331 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ODF2Q5BJF6 829 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 CMPK2Q5EBM0 449 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 CEP128Q6ZU80 1094 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF572Q7Z3I7 529 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ATP11CQ8NB49 1132 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 UCMAQ8WVF2 138 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 IFT81Q8WYA0 676 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 IP6K1Q92551 441 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms