RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 BCAS4Q8TDM0 211 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 KCNJ14Q9UNX9 436 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 EPN1Q9Y6I3 576 aaPredicted RBP8.68□□□□□ -1.02
LIMD1-201ENST00000273317 USP19O94966 1318 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 ERBB4Q15303 1308 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 ARHGEF18Q6ZSZ5 1173 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 NEK8Q86SG6 692 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.68□□□□□ -1.024e-12■■■■■ 96.3
LIMD1-201ENST00000273317 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 SEPT10Q9P0V9 454 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 VPS54Q9P1Q0 977 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 KRT10P13645 584 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 IL13P35225 146 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 FAM178BQ8IXR5 827 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 HDAC11Q96DB2 347 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 SERPINI1Q99574 410 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 ZSWIM6Q9HCJ5 1215 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 HESX1Q9UBX0 185 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 POLR2MP0CAP2 368 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 DYMQ7RTS9 669 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 RPAINQ86UA6 219 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 TFCP2L1Q9NZI6 479 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 TMEM63CQ9P1W3 806 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 FOSP01100 380 aaPredicted RBP8.68□□□□□ -1.02
LIMD1-201ENST00000273317 USH1GQ495M9 461 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 ANKRD35Q8N283 1001 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 PLEKHA4Q9H4M7 779 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 CARMIL3Q8ND23 1372 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 ECE1P42892 770 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 INTS9Q9NV88 658 aaKnown RBP8.68□□□□□ -1.02
LIMD1-201ENST00000273317 RNF123Q5XPI4 1314 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 CTSWP56202 376 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 GUCY2DQ02846 1103 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 TFDP1Q14186 410 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 EXOC3L4Q17RC7 722 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 FOXP1Q9H334 677 aaPredicted RBP8.68□□□□□ -1.02
LIMD1-201ENST00000273317 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.68□□□□□ -1.02
LIMD1-201ENST00000273317 CDC42BPGQ6DT37 1551 aa8.68□□□□□ -1.02
LIMD1-201ENST00000273317 RIMBP2O15034 1052 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 PTPREP23469 700 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 KRT39Q6A163 491 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 PANX2Q96RD6 677 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ANKFY1Q9P2R3 1169 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 TTLL3Q9Y4R7 772 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 F8W8V4 182 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 SPECC1L-ADORA2AF8WAN1 911 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ADPGKQ9BRR6 497 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 A0A087WUV0 522 aaPredicted RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ATP5HO75947 161 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ECM2O94769 699 aaPredicted RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ECEL1O95672 775 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 YWHAGP61981 247 aaKnown RBP eCLIP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ALCAMQ13740 583 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ARHGEF16Q5VV41 709 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 RSBN1LQ6PCB5 846 aaPredicted RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 NLRC4Q9NPP4 1024 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 REREQ9P2R6 1566 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 TYW5A2RUC4 315 aaKnown RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 ABCB4P21439 1286 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 AS3MTQ9HBK9 375 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 JAK2O60674 1132 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 PPP6R2O75170 966 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 CDC37Q16543 378 aaPredicted RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 DDX39AO00148 427 aaKnown RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 MCF2LO15068 1137 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 GSTA4O15217 222 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 TOM1O60784 492 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 GNL1P36915 607 aaPredicted RBP8.67□□□□□ -1.02
LIMD1-201ENST00000273317 PPP2R5CQ13362 524 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 TSPOAP1O95153 1857 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 CPP00450 1065 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 NT5C2P49902 561 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 POMGNT1Q8WZA1 660 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 MAP3K19Q56UN5 1328 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 PCDHA7Q9UN72 937 aa8.67□□□□□ -1.02
LIMD1-201ENST00000273317 KIF22Q14807 665 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 SUCLG2Q96I99 432 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 BIN2Q9UBW5 565 aaPredicted RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 RWDD2AQ9UIY3 292 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ATP7BP35670 1465 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ZNF233A6NK53 670 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 NEURL1BA8MQ27 555 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 CAPN9O14815 690 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 BIRC2Q13490 618 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 KLC3Q6P597 504 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 SPC25Q9HBM1 224 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 TET3O43151 1660 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 RASIP1Q5U651 963 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ERVV-2B6SEH9 535 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 CCT5P48643 541 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 PDCD7Q8N8D1 485 aaKnown RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 RUBCNQ92622 972 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 MTMR6Q9Y217 621 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 NUB1Q9Y5A7 615 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 IFT88Q13099 833 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 TGFBRAP1Q8WUH2 860 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 MYL10Q9BUA6 226 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 DIS3Q9Y2L1 958 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms