RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 RUBCNQ92622 972 aa9.75□□□□□ -0.85
CTDSPL-201ENST00000273179 C8orf37Q96NL8 207 aa9.75□□□□□ -0.85
CTDSPL-201ENST00000273179 GBP5Q96PP8 586 aa9.75□□□□□ -0.85
CTDSPL-201ENST00000273179 ADNPQ9H2P0 1102 aa9.75□□□□□ -0.85
CTDSPL-201ENST00000273179 C12orf4Q9NQ89 552 aa9.75□□□□□ -0.85
CTDSPL-201ENST00000273179 IGSF5Q9NSI5 407 aa9.75□□□□□ -0.85
CTDSPL-201ENST00000273179 ZNF624Q9P2J8 865 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL-201ENST00000273179 VPS37CA5D8V6 355 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 PSMD14O00487 310 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 E2F3O00716 465 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ZBTB43O43298 467 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ZNF3P17036 446 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 GNL1P36915 607 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ST5P78524 1137 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 CCDC14Q49A88 953 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 BOLA3Q53S33 107 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 TWF2Q6IBS0 349 aaKnown RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 NLGN1Q8N2Q7 840 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 GIMAP1Q8WWP7 306 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 NCLNQ969V3 563 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 TBC1D20Q96BZ9 403 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 CABP2Q9NPB3 220 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 DDX21Q9NR30 783 aaKnown RBP eCLIP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 HOXC10Q9NYD6 342 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 MADDQ8WXG6 1647 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ORC4O43929 436 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 C6orf222P0C671 652 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 TNFAIP3P21580 790 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 HNF1BP35680 557 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 MTTPP55157 894 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 OR8H2Q8N162 312 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 CNKSR1Q969H4 720 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 RTEL1Q9NZ71 1219 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ATP11BQ9Y2G3 1177 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 PPRC1Q5VV67 1664 aaKnown RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 CASQ2O14958 399 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 GNPATO15228 680 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 CAPN1P07384 714 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 KLHL40Q2TBA0 621 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ESCO1Q5FWF5 840 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 SMYD1Q8NB12 490 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 PSKH2Q96QS6 385 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ZSCAN16Q9H4T2 348 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 BAIAP2L1Q9UHR4 511 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 ATF7P17544 494 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 MRPL12P52815 198 aaKnown RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 MRPS15P82914 257 aaKnown RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 EMC10Q5UCC4 262 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 PI16Q6UXB8 463 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 VPS36Q86VN1 386 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 TAB3Q8N5C8 712 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 APPL2Q8NEU8 664 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 TOR1AIP2Q8NFQ8 470 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 DDI1Q8WTU0 396 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 CNDP2Q96KP4 475 aaKnown RBP9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 PSD3Q9NYI0 1048 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 MYO1AQ9UBC5 1043 aa9.74□□□□□ -0.85
CTDSPL-201ENST00000273179 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 ATP5HO75947 161 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 HOXD10P28358 340 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 SOX5P35711 763 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 SPATA1Q5VX52 437 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 TTC25Q96NG3 672 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 UTP14AQ9BVJ6 771 aaKnown RBP9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 GLT8D2Q9H1C3 349 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 ADAM21Q9UKJ8 722 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 SPDYE5A6NIY4 337 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 GNAT3A8MTJ3 354 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 WDR46O15213 610 aaKnown RBP9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 SKIP12755 728 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 MAPK9P45984 424 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 CAGE1Q8TC20 777 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 NELL1Q92832 810 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 A1CFQ9NQ94 594 aaKnown RBP9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 STARD7Q9NQZ5 370 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 QPCTLQ9NXS2 382 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 EURLQ9NYK6 297 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 FRMPD1Q5SYB0 1578 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 MINK1Q8N4C8 1332 aaPredicted RBP9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 SNTNA6NMZ2 147 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 TTI1O43156 1089 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 SEC31AO94979 1220 aaKnown RBP9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 FBXO38Q6PIJ6 1188 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 ARAP3Q8WWN8 1544 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 TSPOAP1O95153 1857 aa9.73□□□□□ -0.85
CTDSPL-201ENST00000273179 GOLGA8QA0A0J9YX86 632 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 SYCE3A1L190 88 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 GOLGA8OA6NCC3 632 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 GOLGA8NF8WBI6 632 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 SLC3A2P08195 630 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 TCF7P36402 384 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
CTDSPL-201ENST00000273179 FAM133BQ5BKY9 247 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms