RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 ANKRD49Q8WVL7 239 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.11■□□□□ 0.33
UBR3-201ENST00000272793 YWHAEP62258 255 aaKnown RBP17.11■□□□□ 0.33
UBR3-201ENST00000272793 KLHL24Q6TFL4 600 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 ZNF804AQ7Z570 1209 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 EXT2Q93063 718 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 HAUS3Q68CZ6 603 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 NDE1Q9NXR1 346 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 AIPL1Q9NZN9 384 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 PPP1R2P41236 205 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 GINS4Q9BRT9 223 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 DPH5Q9H2P9 285 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 SNAP25P60880 206 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 SAR1BQ9Y6B6 198 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 ZNF148Q9UQR1 794 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 PAK1Q13153 545 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 THOC5Q13769 683 aaKnown RBP17.1■□□□□ 0.33
UBR3-201ENST00000272793 USH1GQ495M9 461 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■■■■ 29
UBR3-201ENST00000272793 ZFP42Q96MM3 310 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 TBK1Q9UHD2 729 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 CPP00450 1065 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 ADKP55263 362 aaKnown RBP17.1■□□□□ 0.33
UBR3-201ENST00000272793 DISC1Q9NRI5 854 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 RPN1P04843 607 aaKnown RBP17.1■□□□□ 0.33
UBR3-201ENST00000272793 RRAGAQ7L523 313 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 RRM2BQ7LG56 351 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 DNAJC7Q99615 494 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 FBXL5Q9UKA1 691 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 H0Y626 953 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 TRIM16O95361 564 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 CPA1P15085 419 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
UBR3-201ENST00000272793 SAP30BPQ9UHR5 308 aaKnown RBP17.1■□□□□ 0.33
UBR3-201ENST00000272793 CHEK2O96017 543 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 ASCC2Q9H1I8 757 aaPredicted RBP17.09■□□□□ 0.33
UBR3-201ENST00000272793 DMAP1Q9NPF5 467 aaPredicted RBP17.09■□□□□ 0.33
UBR3-201ENST00000272793 EXOC3O60645 756 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 SLFN14P0C7P3 912 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 BASP1P80723 227 aaKnown RBP17.09■□□□□ 0.33
UBR3-201ENST00000272793 LRRC8BQ6P9F7 803 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 CCDC149Q6ZUS6 474 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
UBR3-201ENST00000272793 ARHGAP26Q9UNA1 814 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 TAB2Q9NYJ8 693 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 PAMP19021 973 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 CENPAP49450 140 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 ANO4Q32M45 955 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 CBX8Q9HC52 389 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 MSH2P43246 934 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 SELENONQ9NZV5 590 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 BAZ2BQ9UIF8 2168 aaKnown RBP17.09■□□□□ 0.33
UBR3-201ENST00000272793 PYGMP11217 842 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 PLCD1P51178 756 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 C11orf88Q6PI97 169 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 C1orf228Q6PIY5 440 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 TLK1Q9UKI8 766 aa17.09■□□□□ 0.33
UBR3-201ENST00000272793 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.09■□□□□ 0.33
UBR3-201ENST00000272793 NSUN2Q08J23 767 aaKnown RBP eCLIP17.08■□□□□ 0.33
UBR3-201ENST00000272793 C6orf118Q5T5N4 469 aa17.08■□□□□ 0.33
UBR3-201ENST00000272793 CUX1P39880 1505 aa17.08■□□□□ 0.33
UBR3-201ENST00000272793 ZNF513Q8N8E2 541 aaPredicted RBP17.08■□□□□ 0.33
UBR3-201ENST00000272793 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.33
UBR3-201ENST00000272793 WIZO95785 1651 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 BUB1O43683 1085 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 ZNF75DP51815 510 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 STAT2P52630 851 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 SLC26A7Q8TE54 656 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 TSC22D2O75157 780 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 TADA3O75528 432 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 MED21Q13503 144 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 SPOPLQ6IQ16 392 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 MEIS3Q99687 375 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 ASPSCR1Q9BZE9 553 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 DNM3Q9UQ16 869 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 NSFP46459 744 aaKnown RBP17.08■□□□□ 0.32
UBR3-201ENST00000272793 PDE1AP54750 535 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 CLCA2Q9UQC9 943 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
UBR3-201ENST00000272793 GOLGA8FQ08AF8 430 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 GOLGA8DPQ0D2H9 430 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 ZYXQ15942 572 aaKnown RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 LUZP2Q86TE4 346 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 MAGEA1P43355 309 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 MCF2L2Q86YR7 1114 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 SMAD5Q99717 465 aaKnown RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 CALCRLQ16602 461 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 HMGB3O15347 200 aaKnown RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 TMCC1O94876 653 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 SIKE1Q9BRV8 207 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 SOX13Q9UN79 622 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms