RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
CCDC40-201ENST00000269318 MIGA2Q7L4E1 593 aa18.76■□□□□ 0.59
CCDC40-201ENST00000269318 SMYD4Q8IYR2 804 aaPredicted RBP18.76■□□□□ 0.59
CCDC40-201ENST00000269318 SPICE1Q8N0Z3 855 aa18.76■□□□□ 0.59
CCDC40-201ENST00000269318 RASSF8Q8NHQ8 419 aa18.76■□□□□ 0.59
CCDC40-201ENST00000269318 MAGEF1Q9HAY2 307 aa18.76■□□□□ 0.59
CCDC40-201ENST00000269318 BCS1LQ9Y276 419 aa18.76■□□□□ 0.59
CCDC40-201ENST00000269318 CBFA2T2O43439 604 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 EGFRP00533 1210 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 SERPINC1P01008 464 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 RPN1P04843 607 aaKnown RBP18.75■□□□□ 0.59
CCDC40-201ENST00000269318 FBXO11Q86XK2 927 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 NAP1L5Q96NT1 182 aaPredicted RBP18.75■□□□□ 0.59
CCDC40-201ENST00000269318 RMND1Q9NWS8 449 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 PRR12Q9ULL5 1215 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 MYH7BA7E2Y1 1941 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 GCFC2P16383 781 aaKnown RBP18.75■□□□□ 0.59
CCDC40-201ENST00000269318 PRELPP51888 382 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 GSDMDP57764 484 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 PLIN2Q99541 437 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 GOPCQ9HD26 462 aa18.75■□□□□ 0.59
CCDC40-201ENST00000269318 DDX25Q9UHL0 483 aaKnown RBP18.75■□□□□ 0.59
CCDC40-201ENST00000269318 SYNRGQ9UMZ2 1314 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 PTGER2P43116 358 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 IKQ13123 557 aaPredicted RBP18.74■□□□□ 0.59
CCDC40-201ENST00000269318 AP3B2Q13367 1082 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 PDIA5Q14554 519 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
CCDC40-201ENST00000269318 SPATA1Q5VX52 437 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 TMC6Q7Z403 805 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 CRYGNQ8WXF5 182 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 P2RX7Q99572 595 aaKnown RBP18.74■□□□□ 0.59
CCDC40-201ENST00000269318 ANO3Q9BYT9 981 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 SAMSN1Q9NSI8 373 aaKnown RBP18.74■□□□□ 0.59
CCDC40-201ENST00000269318 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
CCDC40-201ENST00000269318 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.74■□□□□ 0.59
CCDC40-201ENST00000269318 KLRC4O43908 158 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 STAT2P52630 851 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 RASA3Q14644 834 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 KCNB1Q14721 858 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 KLHL10Q6JEL2 608 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 HAS1Q92839 578 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 TEPSINQ96N21 525 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 NAP1L4Q99733 375 aaKnown RBP18.73■□□□□ 0.59
CCDC40-201ENST00000269318 FZD9O00144 591 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 OPLAHO14841 1288 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 USP11P51784 963 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 RASSF7Q02833 373 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 TMEM266Q2M3C6 531 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 MBOAT7Q96N66 472 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 VCPKMTQ9H867 229 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 LRWD1Q9UFC0 647 aa18.73■□□□□ 0.59
CCDC40-201ENST00000269318 CYP3A7-CYP3A51PA0A087WV96 503 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 PHF20L1A8MW92 1017 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 CYP3A7P24462 503 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 CCZ1BP86790 482 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 CCZ1P86791 482 aaPredicted RBP18.72■□□□□ 0.59
CCDC40-201ENST00000269318 SEMA3FQ13275 785 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 GRB10Q13322 594 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 USH1GQ495M9 461 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 HSP90AA4PQ58FG1 418 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 FAM83BQ5T0W9 1011 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 MCTP2Q6DN12 878 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 GMPSP49915 693 aaPredicted RBP18.72■□□□□ 0.59
CCDC40-201ENST00000269318 STX17P56962 302 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 CDKAL1Q5VV42 579 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 VSTM4Q8IW00 320 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 PNMA5Q96PV4 448 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 RAB34Q9BZG1 259 aa18.72■□□□□ 0.59
CCDC40-201ENST00000269318 SCAF8Q9UPN6 1271 aaKnown RBP18.72■□□□□ 0.59
CCDC40-201ENST00000269318 POTEMA6NI47 508 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 PLA2G6O60733 806 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 ASNSP08243 561 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 TAL1P17542 331 aaPredicted RBP18.71■□□□□ 0.59
CCDC40-201ENST00000269318 KMT5BQ4FZB7 885 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 ARMCX5Q6P1M9 558 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 MOXD1Q6UVY6 613 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
CCDC40-201ENST00000269318 CALML4Q96GE6 196 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 C7orf25Q9BPX7 421 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 GLIS2Q9BZE0 524 aaPredicted RBP18.71■□□□□ 0.59
CCDC40-201ENST00000269318 TRIM9Q9C026 710 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 RWDD2AQ9UIY3 292 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 CTNND2Q9UQB3 1225 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 GDAQ9Y2T3 454 aa18.71■□□□□ 0.59
CCDC40-201ENST00000269318 RHOBTB3O94955 611 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 TNFAIP1Q13829 316 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 MICALL2Q8IY33 904 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 CCDC150Q8NCX0 1101 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 SH2D4AQ9H788 454 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 KCNMB3Q9NPA1 279 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 BLOC1S4Q9NUP1 217 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 PIK3CDO00329 1044 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 CDK11BP21127 795 aaKnown RBP18.7■□□□□ 0.58
CCDC40-201ENST00000269318 NUDT12Q9BQG2 462 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 RANBP17Q9H2T7 1088 aaKnown RBP18.7■□□□□ 0.58
CCDC40-201ENST00000269318 STK17AQ9UEE5 414 aa18.7■□□□□ 0.58
CCDC40-201ENST00000269318 FOSP01100 380 aaPredicted RBP18.69■□□□□ 0.58
CCDC40-201ENST00000269318 SKILP12757 684 aa18.69■□□□□ 0.58
CCDC40-201ENST00000269318 PRCPP42785 496 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 399.6 ms