RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 GOLGA6BA6NDN3 693 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 H0YCG3 227 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 EEF1GP26641 437 aaKnown RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 ARL1P40616 181 aaPredicted RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 CLUL1Q15846 466 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 P2RX5Q93086 422 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 DCPSQ96C86 337 aaKnown RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 RFX7Q2KHR2 1363 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 E7EVH7 732 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 CCDC93Q567U6 631 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 NCAPG2Q86XI2 1143 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 TSC1Q92574 1164 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 NEDD4P46934 1319 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 GOLGA6CA6NDK9 693 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 GOLGA6DP0CG33 693 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 CYP2D6P10635 497 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 DMP1Q13316 513 aaPredicted RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 SH3RF3Q8TEJ3 882 aaPredicted RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 RNF34Q969K3 372 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 ZNF577Q9BSK1 485 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 SUGCTQ9HAC7 445 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 GOLGA6AQ9NYA3 693 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 STK17AQ9UEE5 414 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 ATP5DP30049 168 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 ERCC6LQ2NKX8 1250 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
CDH3-201ENST00000264012 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 TMTC3Q6ZXV5 915 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 EPSTI1Q96J88 318 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 HYOU1Q9Y4L1 999 aa15.39■□□□□ 0.05
CDH3-201ENST00000264012 EXOC3L4Q17RC7 722 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 CAMSAP1Q5T5Y3 1602 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 NR2F2P24468 414 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 MNAT1P51948 309 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 MASTLQ96GX5 879 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 C1orf112Q9NSG2 853 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 BUB1O43683 1085 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 MYL1P05976 194 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 DLATP10515 647 aaKnown RBP15.38■□□□□ 0.05
CDH3-201ENST00000264012 STAT2P52630 851 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 LRRC41Q15345 812 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 PPM1KQ8N3J5 372 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 C1orf167Q5SNV9 1468 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 H2AFZP0C0S5 128 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 YWHAEP62258 255 aaKnown RBP15.38■□□□□ 0.05
CDH3-201ENST00000264012 SYDE2Q5VT97 1194 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 H2AFVQ71UI9 128 aa15.38■□□□□ 0.05
CDH3-201ENST00000264012 KCNK3O14649 394 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 LONRF2Q1L5Z9 754 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 FOXP4Q8IVH2 680 aaPredicted RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 ENOX1Q8TC92 643 aaKnown RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 WDR11Q9BZH6 1224 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 CPDO75976 1380 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 DAPK3O43293 454 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 POLGP54098 1239 aaPredicted RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 CACTINQ8WUQ7 758 aaKnown RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 LRRIQ4A6NIV6 560 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 P4HA1P13674 534 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 CCDC6Q16204 474 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 UBE2SQ16763 222 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 TMED8Q6PL24 325 aaPredicted RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 MRRFQ96E11 262 aaKnown RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 GDAP1L1Q96MZ0 367 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 PLEKHA4Q9H4M7 779 aa15.37■□□□□ 0.05
CDH3-201ENST00000264012 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
CDH3-201ENST00000264012 VIMP08670 466 aaKnown RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 PTPN21Q16825 1174 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 ANKRD13CQ8N6S4 541 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 CD209Q9NNX6 404 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 RIC8AQ9NPQ8 531 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 PTPRUQ92729 1446 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 M0QZ92 97 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 KCNQ2O43526 872 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 USP14P54578 494 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 FKBP3Q00688 224 aaKnown RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 GOLGA8FQ08AF8 430 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 GOLGA8DPQ0D2H9 430 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 ARL6IP4Q66PJ3 421 aaKnown RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 SLC5A4Q9NY91 659 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 OVOS2A0A0G2JMS6 1433 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 OVOS2A0A0J9YW53 1432 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 OVOS2Q6IE36 1432 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 TCP1P17987 556 aaKnown RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 PLCG1P19174 1290 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 GPR162Q16538 588 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 SAMSN1Q9NSI8 373 aaKnown RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 WDR19Q8NEZ3 1342 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 CDC37Q16543 378 aaPredicted RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 PPP1R21Q6ZMI0 780 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms