RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 GCOM1H8Y6P7 765 aaPredicted RBP25.84■■□□□ 1.73
UFD1-201ENST00000263202 EDIL3O43854 480 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 FOSP01100 380 aaPredicted RBP25.84■■□□□ 1.73
UFD1-201ENST00000263202 POLR2MP0CAP2 368 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 LETM2Q2VYF4 491 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 MUM1L1Q5H9M0 696 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 ADALQ6DHV7 355 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 LBX2Q6XYB7 198 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 RIPK3Q9Y572 518 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 NFIBO00712 420 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 AXDND1Q5T1B0 1012 aaPredicted RBP25.84■■□□□ 1.73
UFD1-201ENST00000263202 SNRNP48Q6IEG0 339 aaKnown RBP25.84■■□□□ 1.73
UFD1-201ENST00000263202 SAPCD2Q86UD0 394 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 HOMER2Q9NSB8 354 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 MRVI1Q9Y6F6 885 aa25.84■■□□□ 1.73
UFD1-201ENST00000263202 HSD17B4P51659 736 aa25.83■■□□□ 1.73
UFD1-201ENST00000263202 ATP2C1P98194 919 aaPredicted RBP25.83■■□□□ 1.73
UFD1-201ENST00000263202 GHRHRQ02643 423 aa25.83■■□□□ 1.73
UFD1-201ENST00000263202 PTGDRQ13258 359 aa25.83■■□□□ 1.73
UFD1-201ENST00000263202 MB21D1Q8N884 522 aa25.83■■□□□ 1.73
UFD1-201ENST00000263202 TRERF1Q96PN7 1200 aa25.83■■□□□ 1.73
UFD1-201ENST00000263202 TEX13BQ9BXU2 312 aa25.83■■□□□ 1.73
UFD1-201ENST00000263202 CCL15-CCL14A0A0B4J2E2 113 aa25.82■■□□□ 1.72
UFD1-201ENST00000263202 SPDYE3A6NKU9 549 aa25.82■■□□□ 1.72
UFD1-201ENST00000263202 OSBPP22059 807 aa25.82■■□□□ 1.72
UFD1-201ENST00000263202 HERVK_113P62684 666 aa25.82■■□□□ 1.72
UFD1-201ENST00000263202 CCL15Q16663 113 aa25.82■■□□□ 1.72
UFD1-201ENST00000263202 MCF2L2Q86YR7 1114 aa25.82■■□□□ 1.72
UFD1-201ENST00000263202 C4orf32Q8N8J7 132 aa25.82■■□□□ 1.72
UFD1-201ENST00000263202 FBXO2Q9UK22 296 aaPredicted RBP25.82■■□□□ 1.72
UFD1-201ENST00000263202 CCNT1O60563 726 aaKnown RBP25.81■■□□□ 1.72
UFD1-201ENST00000263202 PTPREP23469 700 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 KRI1Q8N9T8 703 aaKnown RBP25.81■■□□□ 1.72
UFD1-201ENST00000263202 BRI3BPQ8WY22 251 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 RNF146Q9NTX7 359 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 BTBD7Q9P203 1132 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 A0A1W2PQ27 194 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 A0A1W2PQ64 194 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 A0A1W2PQD8 194 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 CUTAO60888 179 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 STAT3P40763 770 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 RASAL3Q86YV0 1011 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 CRYGNQ8WXF5 182 aa25.81■■□□□ 1.72
UFD1-201ENST00000263202 SRPRBQ9Y5M8 271 aaKnown RBP25.81■■□□□ 1.72
UFD1-201ENST00000263202 TOMM70O94826 608 aa25.8■■□□□ 1.72
UFD1-201ENST00000263202 ZNF157P51786 506 aaPredicted RBP25.8■■□□□ 1.72
UFD1-201ENST00000263202 ORC2Q13416 577 aaPredicted RBP25.8■■□□□ 1.72
UFD1-201ENST00000263202 PLS1Q14651 629 aa25.8■■□□□ 1.72
UFD1-201ENST00000263202 FCHSD1Q86WN1 690 aa25.8■■□□□ 1.72
UFD1-201ENST00000263202 SAMD3Q8N6K7 520 aa25.8■■□□□ 1.72
UFD1-201ENST00000263202 CLIC6Q96NY7 704 aa25.8■■□□□ 1.72
UFD1-201ENST00000263202 SLC45A1Q9Y2W3 748 aa25.8■■□□□ 1.72
UFD1-201ENST00000263202 LIG1P18858 919 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 SREBF1P36956 1147 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 TKFCQ3LXA3 575 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 CCAR1Q8IX12 1150 aaKnown RBP25.79■■□□□ 1.72
UFD1-201ENST00000263202 MAP3K20Q9NYL2 800 aaKnown RBP25.79■■□□□ 1.72
UFD1-201ENST00000263202 TLL2Q9Y6L7 1015 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 BTBD19C9JJ37 291 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 USP11P51784 963 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 GRIN1Q05586 938 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 PPP4R3AQ6IN85 833 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 RGMBQ6NW40 437 aa25.79■■□□□ 1.72
UFD1-201ENST00000263202 PEX10O60683 326 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 CNMDO75829 334 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 TDP2O95551 362 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 ARHGAP4P98171 946 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 ANKRD23Q86SG2 305 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 TMEM60Q9H2L4 133 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 GOLPH3LQ9H4A5 285 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 PNMA3Q9UL41 463 aa25.78■■□□□ 1.72
UFD1-201ENST00000263202 PDHXO00330 501 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 NEMFO60524 1076 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 CAVIN1Q6NZI2 390 aaKnown RBP25.77■■□□□ 1.72
UFD1-201ENST00000263202 MRPS27Q92552 414 aaKnown RBP25.77■■□□□ 1.72
UFD1-201ENST00000263202 FERMT2Q96AC1 680 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 COL20A1Q9P218 1284 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 LAD1O00515 517 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 CMA1P23946 247 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 ARL6IP4Q66PJ3 421 aaKnown RBP25.77■■□□□ 1.72
UFD1-201ENST00000263202 SHC4Q6S5L8 630 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 RIOX2Q8IUF8 465 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 FSIP1Q8NA03 581 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 NAP1L4Q99733 375 aaKnown RBP25.77■■□□□ 1.72
UFD1-201ENST00000263202 PAGR1Q9BTK6 254 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 SPATC1LQ9H0A9 340 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 RBPJLQ9UBG7 517 aa25.77■■□□□ 1.72
UFD1-201ENST00000263202 GCFC2P16383 781 aaKnown RBP25.76■■□□□ 1.71
UFD1-201ENST00000263202 ZNF579Q8NAF0 562 aaKnown RBP25.76■■□□□ 1.71
UFD1-201ENST00000263202 ACAD9Q9H845 621 aa25.76■■□□□ 1.71
UFD1-201ENST00000263202 TMEM63CQ9P1W3 806 aa25.76■■□□□ 1.71
UFD1-201ENST00000263202 TESPA1A2RU30 521 aaPredicted RBP25.75■■□□□ 1.71
UFD1-201ENST00000263202 SLC37A4O43826 429 aa25.75■■□□□ 1.71
UFD1-201ENST00000263202 CYP2C8P10632 490 aa25.75■■□□□ 1.71
UFD1-201ENST00000263202 RPS6P62753 249 aaKnown RBP25.75■■□□□ 1.71
UFD1-201ENST00000263202 IL17AQ16552 155 aa25.75■■□□□ 1.71
UFD1-201ENST00000263202 SLC30A10Q6XR72 485 aa25.75■■□□□ 1.71
UFD1-201ENST00000263202 RNF207Q6ZRF8 634 aa25.75■■□□□ 1.71
UFD1-201ENST00000263202 POTEDQ86YR6 584 aa25.75■■□□□ 1.71
UFD1-201ENST00000263202 SYTL5Q8TDW5 730 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms