RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 LRWD1Q9UFC0 647 aa14.55□□□□□ -0.08
SPTLC1-201ENST00000262554 RGS17Q9UGC6 210 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1-201ENST00000262554 ARHGAP6O43182 974 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 SLC37A4O43826 429 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 KLRC4O43908 158 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 GDF11O95390 407 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 GCFC2P16383 781 aaKnown RBP14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 PDIA5Q14554 519 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 QRICH1Q2TAL8 776 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 RSBN1LQ6PCB5 846 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 ADSSL1Q8N142 457 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 GMCL1P1Q8NEA9 526 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 PPP1R13BQ96KQ4 1090 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 CSRNP1Q96S65 589 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 PSMD1Q99460 953 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 LIMA1Q9UHB6 759 aaKnown RBP14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 HDAC9Q9UKV0 1011 aa14.54□□□□□ -0.08
SPTLC1-201ENST00000262554 H7C1D1 291 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 TUBB4AP04350 444 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 GOLGA8FQ08AF8 430 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 GOLGA8DPQ0D2H9 430 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 CDC37Q16543 378 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 PPFIBP1Q86W92 1011 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 SIAH1Q8IUQ4 282 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 GIMAP8Q8ND71 665 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 GMCL1Q96IK5 515 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 CDK5RAP3Q96JB5 506 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 BAG1Q99933 345 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 C7orf25Q9BPX7 421 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 MMTAG2Q9BU76 263 aaKnown RBP14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 STK17AQ9UEE5 414 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 HERC5Q9UII4 1024 aaKnown RBP14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 MAPK8IP1Q9UQF2 711 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 PCDHA1Q9Y5I3 950 aa14.53□□□□□ -0.08
SPTLC1-201ENST00000262554 F5H6K3 240 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 PSMA7O14818 248 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 TEX33O43247 280 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 STX10O60499 249 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 COBLO75128 1261 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 KLRC3Q07444 240 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 TC2NQ8N9U0 490 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 LRRC15Q8TF66 581 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 TRIM9Q9C026 710 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 EXOC1Q9NV70 894 aa14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 DDX25Q9UHL0 483 aaKnown RBP14.52□□□□□ -0.08
SPTLC1-201ENST00000262554 LRRC10BA6NIK2 292 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 KCNJ18B7U540 433 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 AKR1B15C9JRZ8 316 aaPredicted RBP14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 ZSCAN12O43309 604 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 EDIL3O43854 480 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 GH2P01242 217 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 BAG6P46379 1132 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 ADKP55263 362 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 ASIC1P78348 528 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 KCNJ12Q14500 433 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 KRT31Q15323 416 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 TCP11X2Q5H9J9 407 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 SV2BQ7L1I2 683 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 TMEM139Q8IV31 216 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 LARGE2Q8N3Y3 721 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 KIF18AQ8NI77 898 aa14.52□□□□□ -0.09
SPTLC1-201ENST00000262554 N4BP3O15049 544 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 MARCH6O60337 910 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 RAD17O75943 681 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 VIL1P09327 827 aaKnown RBP14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 CCT6AP40227 531 aaKnown RBP14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 PBX1P40424 430 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 PPP1R2P41236 205 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 DLGAP5Q15398 846 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 KRT79Q5XKE5 535 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 MCTP2Q6DN12 878 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 OGFOD1Q8N543 542 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 DHTKD1Q96HY7 919 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 PANX2Q96RD6 677 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 PDGFDQ9GZP0 370 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.51□□□□□ -0.093e-6■■■■■ 31.2
SPTLC1-201ENST00000262554 SYNPO2Q9UMS6 1093 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 ITIH6Q6UXX5 1313 aa14.51□□□□□ -0.09
SPTLC1-201ENST00000262554 TCP10L2B9ZVM9 353 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 PSMD14O00487 310 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 NDUFB10O96000 172 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 TPM1P09493 284 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 COPB1P53618 953 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 RBM10P98175 930 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 PDE4DQ08499 809 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 GRB10Q13322 594 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 AMNQ9BXJ7 453 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 VPS33BQ9H267 617 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 THAP9Q9H5L6 903 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 BICDL2A1A5D9 508 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 POTEMA6NI47 508 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
SPTLC1-201ENST00000262554 USP17L17D6RBQ6 530 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms