RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TECP42680 631 aa25.3■■□□□ 1.64
SIX3-201ENST00000260653 AP3B2Q13367 1082 aa25.3■■□□□ 1.64
SIX3-201ENST00000260653 NT5DC1Q5TFE4 455 aa25.3■■□□□ 1.64
SIX3-201ENST00000260653 SMARCE1Q969G3 411 aa25.3■■□□□ 1.64
SIX3-201ENST00000260653 WDR46O15213 610 aaKnown RBP25.29■■□□□ 1.64
SIX3-201ENST00000260653 BMP6P22004 513 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 TXKP42681 527 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 SARSP49591 514 aaKnown RBP25.29■■□□□ 1.64
SIX3-201ENST00000260653 PDXDC2PQ6P474 469 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 DLK2Q6UY11 383 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 STAMQ92783 540 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 DISC1Q9NRI5 854 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 MAN1B1Q9UKM7 699 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 BECN2A8MW95 431 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 HOXA13P31271 388 aaPredicted RBP25.29■■□□□ 1.64
SIX3-201ENST00000260653 UBA7P41226 1012 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 SPP2Q13103 211 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 CCDC34Q96HJ3 373 aa25.29■■□□□ 1.64
SIX3-201ENST00000260653 DDX25Q9UHL0 483 aaKnown RBP25.29■■□□□ 1.64
SIX3-201ENST00000260653 GOLGA6L19H0YKK7 550 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 PTPRAP18433 802 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 SPATA20Q8TB22 786 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 KLRG1Q96E93 195 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 AK8Q96MA6 479 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 PYM1Q9BRP8 204 aaKnown RBP25.28■■□□□ 1.64
SIX3-201ENST00000260653 PITPNM2Q9BZ72 1349 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 CCSER1Q9C0I3 900 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 PICK1Q9NRD5 415 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 EMILIN3Q9NT22 766 aa25.28■■□□□ 1.64
SIX3-201ENST00000260653 RASSF8Q8NHQ8 419 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 BPIFA3Q9BQP9 254 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 VCAM1P19320 739 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 STAT6P42226 847 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 PRKG1Q13976 671 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 IGSF22Q8N9C0 903 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 MTRQ99707 1265 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 TANGO6Q9C0B7 1094 aa25.27■■□□□ 1.64
SIX3-201ENST00000260653 GCFC2P16383 781 aaKnown RBP25.26■■□□□ 1.63
SIX3-201ENST00000260653 TRAF1Q13077 416 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 CRYGNQ8WXF5 182 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 PLIN2Q99541 437 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 SLF1Q9BQI6 1058 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 SPDYE3A6NKU9 549 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 ARHGAP4P98171 946 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 DPYDQ12882 1025 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 NAALADL2Q58DX5 795 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 TBC1D5Q92609 795 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 WDR18Q9BV38 432 aa25.26■■□□□ 1.63
SIX3-201ENST00000260653 SUPT20HL1Q3ZLR7 823 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 CABP7Q86V35 215 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 LDHDQ86WU2 507 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 PRPF38AQ8NAV1 312 aaKnown RBP25.25■■□□□ 1.63
SIX3-201ENST00000260653 HAS1Q92839 578 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 GJA10Q969M2 543 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 PIK3CDO00329 1044 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 CFBP00751 764 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 FOSP01100 380 aaPredicted RBP25.25■■□□□ 1.63
SIX3-201ENST00000260653 FXR2P51116 673 aaKnown RBP eCLIP25.25■■□□□ 1.63
SIX3-201ENST00000260653 USP11P51784 963 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 MCTP2Q6DN12 878 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 ZNF280CQ8ND82 737 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 ZHX2Q9Y6X8 837 aa25.25■■□□□ 1.63
SIX3-201ENST00000260653 SMC2O95347 1197 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 BACE1P56817 501 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 MORC3Q14149 939 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 GLIPR1L2Q4G1C9 344 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 RRAGBQ5VZM2 374 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 LRRC15Q8TF66 581 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 BLZF1Q9H2G9 400 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 PHIPQ8WWQ0 1821 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 ADM5C9JUS6 153 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 ZNF536O15090 1300 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 USP14P54578 494 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 DCPSQ96C86 337 aaKnown RBP25.24■■□□□ 1.63
SIX3-201ENST00000260653 AGBL1Q96MI9 1066 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 MMTAG2Q9BU76 263 aaKnown RBP25.24■■□□□ 1.63
SIX3-201ENST00000260653 RPAP3Q9H6T3 665 aaPredicted RBP25.24■■□□□ 1.63
SIX3-201ENST00000260653 AS3MTQ9HBK9 375 aa25.24■■□□□ 1.63
SIX3-201ENST00000260653 POTEMA6NI47 508 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 FLOT1O75955 427 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 SREBF1P36956 1147 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 TMEM266Q2M3C6 531 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 FCHSD1Q86WN1 690 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 NAP1L4Q99733 375 aaKnown RBP25.23■■□□□ 1.63
SIX3-201ENST00000260653 TTC12Q9H892 705 aaPredicted RBP25.23■■□□□ 1.63
SIX3-201ENST00000260653 CCDC39Q9UFE4 941 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 UIMC1Q96RL1 719 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 LRWD1Q9UFC0 647 aa25.23■■□□□ 1.63
SIX3-201ENST00000260653 MRPL11Q9Y3B7 192 aaKnown RBP25.23■■□□□ 1.63
SIX3-201ENST00000260653 ICAM1P05362 532 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 PLCG1P19174 1290 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 TRIML1Q8N9V2 468 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.22■■□□□ 1.63
SIX3-201ENST00000260653 CCPG1Q9ULG6 757 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 CYP3A7-CYP3A51PA0A087WV96 503 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 CYP3A7P24462 503 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 CUL4BQ13620 913 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 NCAPHQ15003 741 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 SULF1Q8IWU6 871 aa25.22■■□□□ 1.63
SIX3-201ENST00000260653 TRIM5Q9C035 493 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms