RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SPRYD7Q5W111 196 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 GOLPH3LQ9H4A5 285 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 CEP131Q9UPN4 1083 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 A0A1W2PQ27 194 aa20.23■□□□□ 0.83
CCDC115-201ENST00000259229 A0A1W2PQ64 194 aa20.23■□□□□ 0.83
CCDC115-201ENST00000259229 A0A1W2PQD8 194 aa20.23■□□□□ 0.83
CCDC115-201ENST00000259229 ALAS1P13196 640 aa20.23■□□□□ 0.83
CCDC115-201ENST00000259229 PTPREP23469 700 aa20.23■□□□□ 0.83
CCDC115-201ENST00000259229 PNMA2Q9UL42 364 aa20.23■□□□□ 0.83
CCDC115-201ENST00000259229 BMP15O95972 392 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 CFBP00751 764 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 ZBTB48P10074 688 aaPredicted RBP20.22■□□□□ 0.83
CCDC115-201ENST00000259229 HUNKP57058 714 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 PTGDRQ13258 359 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 LETM2Q2VYF4 491 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 CLIC6Q96NY7 704 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 TMEM60Q9H2L4 133 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 TMEM63CQ9P1W3 806 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 BTBD7Q9P203 1132 aa20.22■□□□□ 0.83
CCDC115-201ENST00000259229 PEX10O60683 326 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 CNMDO75829 334 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 SREBF1P36956 1147 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 HERVK_113P62684 666 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 MKRN3Q13064 507 aaKnown RBP20.21■□□□□ 0.83
CCDC115-201ENST00000259229 MCTP2Q6DN12 878 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 SNRNP48Q6IEG0 339 aaKnown RBP20.21■□□□□ 0.83
CCDC115-201ENST00000259229 SHC4Q6S5L8 630 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 SAPCD2Q86UD0 394 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 KRI1Q8N9T8 703 aaKnown RBP20.21■□□□□ 0.83
CCDC115-201ENST00000259229 BRI3BPQ8WY22 251 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 TEX13BQ9BXU2 312 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 HOMER2Q9NSB8 354 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 COL20A1Q9P218 1284 aa20.21■□□□□ 0.83
CCDC115-201ENST00000259229 SRPRBQ9Y5M8 271 aaKnown RBP20.21■□□□□ 0.83
CCDC115-201ENST00000259229 GCOM1H8Y6P7 765 aaPredicted RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 CUTAO60888 179 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 TDP2O95551 362 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 FOSP01100 380 aaPredicted RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 POLR2MP0CAP2 368 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 GTF2A2P52657 109 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 IRX3P78415 501 aaPredicted RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 IL17AQ16552 155 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 RASAL3Q86YV0 1011 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 TRERF1Q96PN7 1200 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 RNF146Q9NTX7 359 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 CTDP1Q9Y5B0 961 aaPredicted RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 GOLGA6L4A6NEF3 574 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 SLC37A4O43826 429 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 CCNT1O60563 726 aaKnown RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 CETPP11597 493 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 ORC2Q13416 577 aaPredicted RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
CCDC115-201ENST00000259229 SMC1BQ8NDV3 1235 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 ENGASEQ8NFI3 743 aa20.2■□□□□ 0.82
CCDC115-201ENST00000259229 CCL15-CCL14A0A0B4J2E2 113 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 FAM237AA0A1B0GTK4 181 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 SPDYE3A6NKU9 549 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 ARHGAP4P98171 946 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 CCL15Q16663 113 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 PPP4R3AQ6IN85 833 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 MB21D1Q8N884 522 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 FSIP1Q8NA03 581 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 MRPS27Q92552 414 aaKnown RBP20.19■□□□□ 0.82
CCDC115-201ENST00000259229 MBOAT7Q96N66 472 aa20.19■□□□□ 0.82
CCDC115-201ENST00000259229 FRMPD4Q14CM0 1322 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 RPTORQ8N122 1335 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 BTBD19C9JJ37 291 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 NR1I2O75469 434 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 CMA1P23946 247 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 STAT3P40763 770 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 PABPC4Q13310 644 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCDC115-201ENST00000259229 SNW1Q13573 536 aaKnown RBP20.18■□□□□ 0.82
CCDC115-201ENST00000259229 RESP18Q5W5W9 173 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 SLC30A10Q6XR72 485 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 FCHSD1Q86WN1 690 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 MCF2L2Q86YR7 1114 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 ZNF579Q8NAF0 562 aaKnown RBP20.18■□□□□ 0.82
CCDC115-201ENST00000259229 ANP32EQ9BTT0 268 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 TXNRD2Q9NNW7 524 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 HPSEQ9Y251 543 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 SLC45A1Q9Y2W3 748 aa20.18■□□□□ 0.82
CCDC115-201ENST00000259229 CYP3A7-CYP3A51PA0A087WV96 503 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 NEMFO60524 1076 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 CYP3A7P24462 503 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 USP11P51784 963 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 TKFCQ3LXA3 575 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 ARL6IP4Q66PJ3 421 aaKnown RBP20.17■□□□□ 0.82
CCDC115-201ENST00000259229 SAMD3Q8N6K7 520 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
CCDC115-201ENST00000259229 FERMT2Q96AC1 680 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 PTPN18Q99952 460 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 CSRNP2Q9H175 543 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 TLL2Q9Y6L7 1015 aa20.17■□□□□ 0.82
CCDC115-201ENST00000259229 A0A1B0GVL5 298 aa20.16■□□□□ 0.82
CCDC115-201ENST00000259229 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
CCDC115-201ENST00000259229 CYP3A4P08684 503 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms