RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 DDB1Q16531 1140 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 ZNF654Q8IZM8 581 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 CFAP61Q8NHU2 1237 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 CCDC68Q9H2F9 335 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 SLC52A2Q9HAB3 445 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 MYCLP12524 364 aaPredicted RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 ECE1P42892 770 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 TRAPPC10P48553 1259 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 NDUFA8P51970 172 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 KPNA2P52292 529 aaKnown RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 MYSM1Q5VVJ2 828 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 SERPINI1Q99574 410 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 FOXP1Q9H334 677 aaPredicted RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 FAM8A1Q9UBU6 413 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 LCMT1Q9UIC8 334 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 LTN1O94822 1766 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 SKIP12755 728 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 POLR2BP30876 1174 aaKnown RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 TDRD7Q8NHU6 1098 aaKnown RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 GDAP1L1Q96MZ0 367 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 ATP8A2Q9NTI2 1148 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 INTS9Q9NV88 658 aaKnown RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 PGRMC1O00264 195 aaKnown RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 KRT19P08727 400 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 COPB1P53618 953 aaKnown RBP5.23□□□□□ -1.57
RC3H1-201ENST00000258349 DIXDC1Q155Q3 683 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 RWDD2AQ9UIY3 292 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 TTLL3Q9Y4R7 772 aa5.23□□□□□ -1.57
RC3H1-201ENST00000258349 VGLL3A8MV65 326 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 GAP43P17677 238 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 TRAPPC3LQ5T215 181 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ARHGEF18Q6ZSZ5 1173 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 KIFC3Q9BVG8 833 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 GCNT4Q9P109 453 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 STK17AQ9UEE5 414 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 NUB1Q9Y5A7 615 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 SMCO2A6NFE2 343 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 A6NJR5 290 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 IKBKBO14920 756 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 IFNB1P01574 187 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 HSPA6P17066 643 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 CHRNA2Q15822 529 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 FAM102BQ5T8I3 360 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 BSPRYQ5W0U4 402 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 CXorf38Q8TB03 319 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ACSBG1Q96GR2 724 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 MRPL46Q9H2W6 279 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 KCNJ14Q9UNX9 436 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 COL4A3BPQ9Y5P4 624 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 MCF2LO15068 1137 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 PPP6R2O75170 966 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ABCB4P21439 1286 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 PPP2R5CQ13362 524 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 PSPC1Q8WXF1 523 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 IFT122Q9HBG6 1241 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 GPHNQ9NQX3 736 aaPredicted RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 USP19O94966 1318 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 SPEF2Q9C093 1822 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 SPECC1L-ADORA2AF8WAN1 911 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 CHL1O00533 1208 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ARHGAP44Q17R89 818 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 EXOC3L4Q17RC7 722 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ARHGEF16Q5VV41 709 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 SYMPKQ92797 1274 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ZMAT2Q96NC0 199 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 MED10Q9BTT4 135 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 NEURL1BA8MQ27 555 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 SGK1O00141 431 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 IL13P35225 146 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 AOC3Q16853 763 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 KLC3Q6P597 504 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 FNBP4Q8N3X1 1017 aaPredicted RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 PSTPIP2Q9H939 334 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 CCDC151A5D8V7 595 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 NSFP46459 744 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ZKSCAN8Q15776 578 aaPredicted RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 NBPF9Q3BBW0 867 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 FAM178BQ8IXR5 827 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 ST13P4Q8IZP2 240 aaPredicted RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 PTPN22Q9Y2R2 807 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 PALM3A6NDB9 673 aaPredicted RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 BUB1O43683 1085 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 SCG2P13521 617 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 BFSP1Q12934 665 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 NR1H3Q13133 447 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 MCF2L2Q86YR7 1114 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 GNPATO15228 680 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 DCTN3O75935 186 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 APOEP02649 317 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 OATP04181 439 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 KRT39Q6A163 491 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 HELBQ8NG08 1087 aaPredicted RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 CNOT6LQ96LI5 555 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 BAZ2AQ9UIF9 1905 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 FER1L4A9Z1Z3 1794 aa5.22□□□□□ -1.57
RC3H1-201ENST00000258349 A0A087WUV0 522 aaPredicted RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 DDX39AO00148 427 aaKnown RBP5.22□□□□□ -1.57
RC3H1-201ENST00000258349 RASGRF2O14827 1237 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms