RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 CETN1Q12798 172 aa11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 STXBP4Q6ZWJ1 553 aa11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 TRMT1LQ7Z2T5 733 aaKnown RBP11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 GPATCH11Q8N954 259 aa11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 SMCR8Q8TEV9 937 aaPredicted RBP11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 TBC1D5Q92609 795 aa11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 CELF1Q92879 486 aaKnown RBP11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 PNKPQ96T60 521 aa11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 PCDHA13Q9Y5I0 950 aa11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 BTDP43251 543 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 SARSP49591 514 aaKnown RBP11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 KCTD16Q68DU8 428 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 RSRC2Q7L4I2 434 aaKnown RBP11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 SH3GLB2Q9NR46 395 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 A6NNZ2 444 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 KRT13P13646 458 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 RPL13P26373 211 aaKnown RBP11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 TUBB8Q3ZCM7 444 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 ADSSL1Q8N142 457 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 PIGSQ96S52 555 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 XDHP47989 1333 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 CNTNAP5Q8WYK1 1306 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 ORC4O43929 436 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 CCDC172P0C7W6 258 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 LIG3P49916 1009 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 EPHB4P54760 987 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 ERVK-24P63145 666 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 TROAPQ12815 778 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 CCDC121Q6ZUS5 278 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 GPBP1Q86WP2 473 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 CERS3Q8IU89 383 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 STAG2Q8N3U4 1231 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 GIMAP7Q8NHV1 300 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 MMS19Q96T76 1030 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 PANK4Q9NVE7 773 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 FAM184BQ9ULE4 1060 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 CAPN11Q9UMQ6 739 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 PCDHA12Q9UN75 941 aa11.14□□□□□ -0.63
SEMA6A-201ENST00000257414 TLDC2A0PJX2 215 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 KCNK3O14649 394 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 FAM13AO94988 1023 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 FGFR2P21802 821 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 EHHADHQ08426 723 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 TXNRD1Q16881 649 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 CDKAL1Q5VV42 579 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 SLC44A5Q8NCS7 719 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 NAP1L4Q99733 375 aaKnown RBP11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 ANO9A1A5B4 782 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 SMIM23A6NLE4 172 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 FOXP2O15409 715 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 SASH3O75995 380 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 ZRANB2O95218 330 aaKnown RBP eCLIP11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 EPB41P11171 864 aaKnown RBP11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 MFSD14BQ5SR56 506 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 TRIM31Q9BZY9 425 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 NT5C3AQ9H0P0 336 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 TAOK3Q9H2K8 898 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 MLXIPQ9HAP2 919 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 EARS2Q5JPH6 523 aaKnown RBP11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 HS2ST1Q7LGA3 356 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 LRRC45Q96CN5 670 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 TFR2Q9UP52 801 aa11.13□□□□□ -0.63
SEMA6A-201ENST00000257414 GCOM1H8Y6P7 765 aaPredicted RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 HEXIM1O94992 359 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 MYZAPP0CAP1 466 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 SSR1P43307 286 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 BEND6Q5SZJ8 279 aaPredicted RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 CCDC26Q8TAB7 109 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 KIFC2Q96AC6 838 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 COA7Q96BR5 231 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 ZC3H12CQ9C0D7 883 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 STK17AQ9UEE5 414 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 TMEM110-MUSTN1A8MSY1 372 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 EIF3CLB5ME19 914 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 PPFIA4O75335 1185 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 GGCXP38435 758 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 KCNB1Q14721 858 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 SEC23AQ15436 765 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 GBP6Q6ZN66 633 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 PEX26Q7Z412 305 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 HNRNPLLQ8WVV9 542 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 CCDC114Q96M63 670 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 KRT12Q99456 494 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 EIF3CQ99613 913 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 AGPAT5Q9NUQ2 364 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 A0A087X0B3 334 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms