RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 OXER1Q8TDS5 423 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.79□□□□□ -0.04
LSM8-201ENST00000249299 FBXO40Q9UH90 709 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 RCOR1Q9UKL0 485 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 RABGAP1Q9Y3P9 1069 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 BAZ2BQ9UIF8 2168 aaKnown RBP14.78□□□□□ -0.04
LSM8-201ENST00000249299 GCOM1H8Y6P7 765 aaPredicted RBP14.78□□□□□ -0.04
LSM8-201ENST00000249299 MEIS2O14770 477 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 SLC25A27O95847 323 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 POLR2MP0CAP2 368 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 STAT3P40763 770 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 HERVK_113P62684 666 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 CCDC174Q6PII3 467 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
LSM8-201ENST00000249299 KCNG4Q8TDN1 519 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 P2RX7Q99572 595 aaKnown RBP14.78□□□□□ -0.04
LSM8-201ENST00000249299 EHMT1Q9H9B1 1298 aa14.78□□□□□ -0.04
LSM8-201ENST00000249299 MYH6P13533 1939 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 OPLAHO14841 1288 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 HSD17B4P51659 736 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 USP11P51784 963 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 CLCN6P51797 869 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 USH1GQ495M9 461 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 ANO1Q5XXA6 986 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 MOXD1Q6UVY6 613 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 RIOX2Q8IUF8 465 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 JMYQ8N9B5 988 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 BRI3BPQ8WY22 251 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 AGBL1Q96MI9 1066 aa14.77□□□□□ -0.04
LSM8-201ENST00000249299 PARK7Q99497 189 aaKnown RBP14.77□□□□□ -0.04
LSM8-201ENST00000249299 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.04
LSM8-201ENST00000249299 SPDYE3A6NKU9 549 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 BTBD19C9JJ37 291 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 PDHXO00330 501 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 LAD1O00515 517 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 GCFC2P16383 781 aaKnown RBP14.76□□□□□ -0.05
LSM8-201ENST00000249299 SNAP25P60880 206 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 SREBF2Q12772 1141 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 SLC39A14Q15043 492 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 PIK3AP1Q6ZUJ8 805 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 CPXCR1Q8N123 301 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 LINC00301Q8NCQ3 95 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 SHCBP1Q8NEM2 672 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 LEO1Q8WVC0 666 aaPredicted RBP14.76□□□□□ -0.05
LSM8-201ENST00000249299 CLEC4DQ8WXI8 215 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 SPATA32Q96LK8 384 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 USP28Q96RU2 1077 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 ABT1Q9ULW3 272 aaKnown RBP14.76□□□□□ -0.05
LSM8-201ENST00000249299 PTPRFP10586 1907 aa14.76□□□□□ -0.05
LSM8-201ENST00000249299 PPP6R2O75170 966 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
LSM8-201ENST00000249299 TOB1P50616 345 aaPredicted RBP14.75□□□□□ -0.05
LSM8-201ENST00000249299 CCNA1P78396 465 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 NFKBIBQ15653 356 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 SNRNP48Q6IEG0 339 aaKnown RBP14.75□□□□□ -0.05
LSM8-201ENST00000249299 PPP4R3AQ6IN85 833 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 FAM173BQ6P4H8 233 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 NEK8Q86SG6 692 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 TRERF1Q96PN7 1200 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 SPATC1LQ9H0A9 340 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 ACAD9Q9H845 621 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 MORF4L1Q9UBU8 362 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 BIN2Q9UBW5 565 aaPredicted RBP14.75□□□□□ -0.05
LSM8-201ENST00000249299 RLFQ13129 1914 aa14.75□□□□□ -0.05
LSM8-201ENST00000249299 RASSF10A6NK89 507 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 FAM155AB1AL88 458 aaPredicted RBP14.74□□□□□ -0.05
LSM8-201ENST00000249299 CYP3A4P08684 503 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 ALAS1P13196 640 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 SREBF1P36956 1147 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 TM4SF4P48230 202 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 APLP1P51693 650 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 NOGQ13253 232 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 SKOR2Q2VWA4 1001 aaPredicted RBP14.74□□□□□ -0.05
LSM8-201ENST00000249299 TTC38Q5R3I4 469 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 ARL6IP4Q66PJ3 421 aaKnown RBP14.74□□□□□ -0.05
LSM8-201ENST00000249299 XRRA1Q6P2D8 792 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 CRYGNQ8WXF5 182 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 MROH8Q9H579 483 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 RNF146Q9NTX7 359 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
LSM8-201ENST00000249299 RBPJLQ9UBG7 517 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 CNPY2Q9Y2B0 182 aa14.74□□□□□ -0.05
LSM8-201ENST00000249299 CYP3A7-CYP3A51PA0A087WV96 503 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 SPTLC2O15270 562 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 ALDH1A1P00352 501 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 CFBP00751 764 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 CYP3A7P24462 503 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 CIITAP33076 1130 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 UBE2HP62256 183 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 STK38Q15208 465 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 PTPAQ15257 358 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 SF3A1Q15459 793 aaKnown RBP14.73□□□□□ -0.05
LSM8-201ENST00000249299 EARS2Q5JPH6 523 aaKnown RBP14.73□□□□□ -0.05
LSM8-201ENST00000249299 JAKMIP3Q5VZ66 844 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 USP17L6PQ6QN14 398 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 GPRC5AQ8NFJ5 357 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 TBCKQ8TEA7 893 aa14.73□□□□□ -0.05
LSM8-201ENST00000249299 SMCR8Q8TEV9 937 aaPredicted RBP14.73□□□□□ -0.05
LSM8-201ENST00000249299 FERMT2Q96AC1 680 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms