RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 QRICH2Q9H0J4 1663 aa21.74■■□□□ 1.07
SOX4-201ENST00000244745 MYO1CO00159 1063 aa21.74■■□□□ 1.07
SOX4-201ENST00000244745 DDX23Q9BUQ8 820 aaKnown RBP21.74■■□□□ 1.07
SOX4-201ENST00000244745 ABCB6Q9NP58 842 aa21.74■■□□□ 1.07
SOX4-201ENST00000244745 CD19P15391 556 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 CAPN12Q6ZSI9 719 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 PIH1D3Q9NQM4 214 aaKnown RBP21.73■■□□□ 1.07
SOX4-201ENST00000244745 ASAP1Q9ULH1 1129 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 TPX2Q9ULW0 747 aaKnown RBP21.73■■□□□ 1.07
SOX4-201ENST00000244745 KSR1Q8IVT5 923 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 GRK7Q8WTQ7 553 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 SEC31BQ9NQW1 1179 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 HEXIM1O94992 359 aaKnown RBP21.73■■□□□ 1.07
SOX4-201ENST00000244745 NSMFQ6X4W1 530 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 GLI2P10070 1586 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 ATP10DQ9P241 1426 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 TMEM232C9JQI7 657 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 CCDC144BQ3MJ40 725 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 ARHGEF25Q86VW2 580 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 PICK1Q9NRD5 415 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 HOMER3Q9NSC5 361 aa21.73■■□□□ 1.07
SOX4-201ENST00000244745 CACNB1Q02641 598 aaPredicted RBP21.72■■□□□ 1.07
SOX4-201ENST00000244745 CASP8Q14790 479 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 PTPN22Q9Y2R2 807 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 SPHKAPQ2M3C7 1700 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 CASQ2O14958 399 aaPredicted RBP21.72■■□□□ 1.07
SOX4-201ENST00000244745 SESN3P58005 492 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 USP27XA6NNY8 438 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 DAPK3O43293 454 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 THAP12O43422 761 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 RAB20Q9NX57 234 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 ZBED4O75132 1171 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 IFNAR1P17181 557 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 PDE6CP51160 858 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 PDLIM2Q96JY6 352 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 NDUFA10O95299 355 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 PPP2R5EQ16537 467 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 RPUSD2Q8IZ73 545 aaKnown RBP21.72■■□□□ 1.07
SOX4-201ENST00000244745 GJA10Q969M2 543 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 ODF2LQ9ULJ1 636 aa21.72■■□□□ 1.07
SOX4-201ENST00000244745 FTCDO95954 541 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 TCP11X2Q5H9J9 407 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 FAM178BQ8IXR5 827 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 PROCA1Q8NCQ7 364 aaPredicted RBP21.71■■□□□ 1.07
SOX4-201ENST00000244745 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 STAG1Q8WVM7 1258 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 TMOD4Q9NZQ9 345 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 SCNN1DP51172 638 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 CYP4A11Q02928 519 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 CASC4Q6P4E1 433 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 THAP9Q9H5L6 903 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 METTL14Q9HCE5 456 aaKnown RBP21.71■■□□□ 1.07
SOX4-201ENST00000244745 STK10O94804 968 aaKnown RBP21.71■■□□□ 1.07
SOX4-201ENST00000244745 MAGEA9P43362 315 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 PPP2R5DQ14738 602 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 KMT5BQ4FZB7 885 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 PALM2Q8IXS6 379 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 RETREG2Q8NC44 543 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 MCTP2Q6DN12 878 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 CDAN1Q8IWY9 1227 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 CCDC197Q8NCU1 140 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 RSAD2Q8WXG1 361 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 P3H4Q92791 437 aa21.71■■□□□ 1.07
SOX4-201ENST00000244745 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.71■■□□□ 1.07
SOX4-201ENST00000244745 COL4A3BPQ9Y5P4 624 aa21.7■■□□□ 1.07
SOX4-201ENST00000244745 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 MAN2A1Q16706 1144 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 ANKRD20A3Q5VUR7 823 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 CLEC17AQ6ZS10 378 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 SDCCAG8Q86SQ7 713 aaPredicted RBP21.7■■□□□ 1.06
SOX4-201ENST00000244745 PCDHA13Q9Y5I0 950 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 MADDQ8WXG6 1647 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 POLR1AO95602 1720 aaPredicted RBP21.7■■□□□ 1.06
SOX4-201ENST00000244745 CYP2D7A0A087X1C5 515 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 PRPF3O43395 683 aaKnown RBP21.7■■□□□ 1.06
SOX4-201ENST00000244745 TROVE2P10155 538 aaKnown RBP eCLIP21.7■■□□□ 1.06
SOX4-201ENST00000244745 MYL7Q01449 175 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 SLC7A5Q01650 507 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 GEN1Q17RS7 908 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 AK8Q96MA6 479 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 TRIM4Q9C037 500 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 SPATS2LQ9NUQ6 558 aaKnown RBP21.7■■□□□ 1.06
SOX4-201ENST00000244745 CROCC2H7BZ55 1655 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 SORBS3O60504 671 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 MFAP3LO75121 409 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 LGSNQ5TDP6 509 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 DHX40Q8IX18 779 aaKnown RBP21.7■■□□□ 1.06
SOX4-201ENST00000244745 TEKT1Q969V4 418 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 IFNB1P01574 187 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 KRT31Q15323 416 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 FBXO11Q86XK2 927 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 RILPQ96NA2 401 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 THRAP3Q9Y2W1 955 aaKnown RBP21.7■■□□□ 1.06
SOX4-201ENST00000244745 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.06
SOX4-201ENST00000244745 N4BP1O75113 896 aaKnown RBP21.69■■□□□ 1.06
SOX4-201ENST00000244745 EIF4A3P38919 411 aaKnown RBP21.69■■□□□ 1.06
SOX4-201ENST00000244745 SMCR8Q8TEV9 937 aaPredicted RBP21.69■■□□□ 1.06
SOX4-201ENST00000244745 N4BP2L2Q92802 583 aaPredicted RBP21.69■■□□□ 1.06
SOX4-201ENST00000244745 GJA3Q9Y6H8 435 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms