RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 ZHX3Q9H4I2 956 aa12.4□□□□□ -0.42
CTCFL-201ENST00000243914 SLC39A2Q9NP94 309 aa12.4□□□□□ -0.42
CTCFL-201ENST00000243914 ZNRF3Q9ULT6 936 aa12.4□□□□□ -0.42
CTCFL-201ENST00000243914 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.42
CTCFL-201ENST00000243914 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
CTCFL-201ENST00000243914 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
CTCFL-201ENST00000243914 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
CTCFL-201ENST00000243914 SUPT20HQ8NEM7 779 aa12.4□□□□□ -0.42
CTCFL-201ENST00000243914 MMTAG2Q9BU76 263 aaKnown RBP12.4□□□□□ -0.42
CTCFL-201ENST00000243914 DDX25Q9UHL0 483 aaKnown RBP12.4□□□□□ -0.42
CTCFL-201ENST00000243914 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 NPHP3-ACAD11A0A0J9YXS1 232 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-201ENST00000243914 TATDN1Q6P1N9 297 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-201ENST00000243914 MLKLQ8NB16 471 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 NELFBQ8WX92 580 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 TAOK3Q9H2K8 898 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 HDAC9Q9UKV0 1011 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 IKBKBO14920 756 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
CTCFL-201ENST00000243914 BMP3P12645 472 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 RASA3Q14644 834 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 BPIFA3Q9BQP9 254 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 BCAS3Q9H6U6 928 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTCFL-201ENST00000243914 V9GYY5 206 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-201ENST00000243914 NFKBIEO00221 500 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 PRELPP51888 382 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 CYP4A11Q02928 519 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
CTCFL-201ENST00000243914 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 FEZ1Q99689 392 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 DESI2Q9BSY9 194 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 BRCA2P51587 3418 aa12.39□□□□□ -0.43
CTCFL-201ENST00000243914 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 CHMP2AO43633 222 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 TNNT1P13805 278 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 NOVP48745 357 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 STK4Q13043 487 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 PDE4DQ08499 809 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 MTF1Q14872 753 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 NT5DC1Q5TFE4 455 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 ARL6IP4Q66PJ3 421 aaKnown RBP12.38□□□□□ -0.43
CTCFL-201ENST00000243914 EHD4Q9H223 541 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 MYOZ2Q9NPC6 264 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 PRR12Q9ULL5 1215 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 CNTNAP1P78357 1384 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 E9PMD0 336 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 GTPBP6O43824 516 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-201ENST00000243914 MRPL12P52815 198 aaKnown RBP12.38□□□□□ -0.43
CTCFL-201ENST00000243914 RGS22Q8NE09 1264 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 SPATA20Q8TB22 786 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 GMLQ99445 158 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 RIC8AQ9NPQ8 531 aa12.38□□□□□ -0.43
CTCFL-201ENST00000243914 A0A0U1RQJ8 604 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 POLD1P28340 1107 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 SYDE2Q5VT97 1194 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 CIAPIN1Q6FI81 312 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 FBXO11Q86XK2 927 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 ATRIPQ8WXE1 791 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 HAS1Q92839 578 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 ZBTB21Q9ULJ3 1066 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 FAM170AA1A519 330 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
CTCFL-201ENST00000243914 GSDMAQ96QA5 445 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 PLIN4Q96Q06 1357 aa12.37□□□□□ -0.43
CTCFL-201ENST00000243914 MEIS2O14770 477 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 CDC25BP30305 580 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 GRB10Q13322 594 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 ENOX1Q8TC92 643 aaKnown RBP12.36□□□□□ -0.43
CTCFL-201ENST00000243914 PURBQ96QR8 312 aaKnown RBP12.36□□□□□ -0.43
CTCFL-201ENST00000243914 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 POTECB2RU33 542 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 DDX39AO00148 427 aaKnown RBP12.36□□□□□ -0.43
CTCFL-201ENST00000243914 PEX10O60683 326 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
CTCFL-201ENST00000243914 GALNT17Q6IS24 598 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 PNMA5Q96PV4 448 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 PCDHA12Q9UN75 941 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 SIPA1L1O43166 1804 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
CTCFL-201ENST00000243914 HDLBPQ00341 1268 aaKnown RBP12.36□□□□□ -0.43
CTCFL-201ENST00000243914 PAK1Q13153 545 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 NCAPH2Q6IBW4 605 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 ZKSCAN4Q969J2 545 aaPredicted RBP12.36□□□□□ -0.43
CTCFL-201ENST00000243914 AGBL1Q96MI9 1066 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 SH2D3AQ9BRG2 576 aa12.36□□□□□ -0.43
CTCFL-201ENST00000243914 SRRTQ9BXP5 876 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms