RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 BICDL2A1A5D9 508 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 PPP1R11O60927 126 aaPredicted RBP18.14■□□□□ 0.49
UBE3D-201ENST00000237186 TXKP42681 527 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 MRPL12P52815 198 aaKnown RBP18.14■□□□□ 0.49
UBE3D-201ENST00000237186 PDE4DQ08499 809 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 GRB10Q13322 594 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 CNNM4Q6P4Q7 775 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 MB21D1Q8N884 522 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 UBE2Q2Q8WVN8 375 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 WDR24Q96S15 920 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 DUSP9Q99956 384 aaKnown RBP18.14■□□□□ 0.49
UBE3D-201ENST00000237186 DESI2Q9BSY9 194 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 EXOC1Q9NV70 894 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 LRWD1Q9UFC0 647 aa18.14■□□□□ 0.49
UBE3D-201ENST00000237186 URI1O94763 535 aaPredicted RBP18.13■□□□□ 0.49
UBE3D-201ENST00000237186 UBXN1Q04323 297 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 SLC15A2Q16348 729 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 TMEM266Q2M3C6 531 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 CYP26C1Q6V0L0 522 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 SV2BQ7L1I2 683 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 CLEC10AQ8IUN9 316 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 P2RX5Q93086 422 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 TRIM47Q96LD4 638 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 GLT8D2Q9H1C3 349 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 BLOC1S4Q9NUP1 217 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
UBE3D-201ENST00000237186 PVALEFA0A1B0GWK0 134 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 SLC37A4O43826 429 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 STK4Q13043 487 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 ERCC6LQ2NKX8 1250 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 DACT2Q5SW24 774 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 TTBK2Q6IQ55 1244 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 CUL5Q93034 780 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 PNMA5Q96PV4 448 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 OGFRQ9NZT2 677 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.12■□□□□ 0.49
UBE3D-201ENST00000237186 V9GYY5 206 aaPredicted RBP18.12■□□□□ 0.49
UBE3D-201ENST00000237186 EFCAB8A8MWE9 144 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 RNF225M0QZC1 329 aaPredicted RBP18.12■□□□□ 0.49
UBE3D-201ENST00000237186 TADA3O75528 432 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 TDP2O95551 362 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 H2AFXP16104 143 aaPredicted RBP18.12■□□□□ 0.49
UBE3D-201ENST00000237186 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
UBE3D-201ENST00000237186 DNM2P50570 870 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 ASIC1P78348 528 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 LRRN4CLQ8ND94 238 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 PI4KBQ9UBF8 816 aa18.12■□□□□ 0.49
UBE3D-201ENST00000237186 DDX41Q9UJV9 622 aaKnown RBP18.12■□□□□ 0.49
UBE3D-201ENST00000237186 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
UBE3D-201ENST00000237186 KRT9P35527 623 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 ERVK-24P63145 666 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 TATDN1Q6P1N9 297 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 FBXO38Q6PIJ6 1188 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 UNC13DQ70J99 1090 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 CSGALNACT2Q8N6G5 542 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 DCAF4Q8WV16 495 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 NUP88Q99567 741 aaPredicted RBP18.11■□□□□ 0.49
UBE3D-201ENST00000237186 NAP1L4Q99733 375 aaKnown RBP18.11■□□□□ 0.49
UBE3D-201ENST00000237186 LRRC27Q9C0I9 530 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 KANSL2Q9H9L4 492 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 MAGEC2Q9UBF1 373 aaPredicted RBP18.11■□□□□ 0.49
UBE3D-201ENST00000237186 MRFAP1Q9Y605 127 aa18.11■□□□□ 0.49
UBE3D-201ENST00000237186 MPHOSPH10O00566 681 aaKnown RBP18.1■□□□□ 0.49
UBE3D-201ENST00000237186 FOXR2Q6PJQ5 311 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 FAM114A1Q8IWE2 563 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 LARP4BQ92615 738 aaKnown RBP18.1■□□□□ 0.49
UBE3D-201ENST00000237186 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.49
UBE3D-201ENST00000237186 DNAJC7Q99615 494 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 KCNQ5Q9NR82 932 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 FAM198AQ9UFP1 575 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 CAPN11Q9UMQ6 739 aa18.1■□□□□ 0.49
UBE3D-201ENST00000237186 GREB1LQ9C091 1923 aaPredicted RBP18.1■□□□□ 0.49
UBE3D-201ENST00000237186 USP17L10C9JJH3 530 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 CCDC96Q2M329 555 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 TMEM119Q4V9L6 283 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 ANKRD40Q6AI12 368 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 CENPPQ6IPU0 288 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 KIAA0895Q8NCT3 520 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 OR8K1Q8NGG5 319 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 UBXN4Q92575 508 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 PSTPIP2Q9H939 334 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 TTC26A0AVF1 554 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 MYMKA6NI61 221 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 SLC26A4O43511 780 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 KIF5CO60282 957 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 FCER1AP12319 257 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 TNNI2P48788 182 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 KRT79Q5XKE5 535 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 KCTD1Q719H9 257 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 ZSCAN29Q8IWY8 852 aaPredicted RBP18.09■□□□□ 0.49
UBE3D-201ENST00000237186 RETREG2Q8NC44 543 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 MNS1Q8NEH6 495 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 RAD54LQ92698 747 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms