RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 USP17L1Q7RTZ2 530 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 HEATR3Q7Z4Q2 680 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 CCDC155Q8N6L0 562 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
NUP88-201ENST00000225696 MS4A14Q96JA4 679 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 IFIH1Q9BYX4 1025 aaKnown RBP13.82□□□□□ -0.2
NUP88-201ENST00000225696 SH2D4AQ9H788 454 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 TFCP2L1Q9NZI6 479 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 PCDHA13Q9Y5I0 950 aa13.82□□□□□ -0.2
NUP88-201ENST00000225696 IPO7O95373 1038 aaKnown RBP13.81□□□□□ -0.2
NUP88-201ENST00000225696 CALML3P27482 149 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
NUP88-201ENST00000225696 TFAP4Q01664 338 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 KCTD19Q17RG1 926 aaPredicted RBP13.81□□□□□ -0.2
NUP88-201ENST00000225696 TTMPQ5BVD1 217 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 SLC51AQ86UW1 340 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 ZSCAN29Q8IWY8 852 aaPredicted RBP13.81□□□□□ -0.2
NUP88-201ENST00000225696 MMGT1Q8N4V1 131 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 PNMA1Q8ND90 353 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 KAT2BQ92831 832 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 CCSER1Q9C0I3 900 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 JRKLQ9Y4A0 524 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
NUP88-201ENST00000225696 KIF11P52732 1056 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 ASIC1P78348 528 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 ERFEQ4G0M1 354 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 TMC4Q7Z404 712 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 CABP7Q86V35 215 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
NUP88-201ENST00000225696 ERGIC2Q96RQ1 377 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 PLAGL2Q9UPG8 496 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 SIK3Q9Y2K2 1263 aa13.81□□□□□ -0.2
NUP88-201ENST00000225696 ZPR1O75312 459 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 LIG3P49916 1009 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 ITPK1Q13572 414 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 SPA17Q15506 151 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 ICE2Q659A1 982 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 SH2D3CQ8N5H7 860 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 RETREG2Q8NC44 543 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 SLC44A5Q8NCS7 719 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 GLIS3Q8NEA6 775 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 MMTAG2Q9BU76 263 aaKnown RBP13.8□□□□□ -0.2
NUP88-201ENST00000225696 RBM12Q9NTZ6 932 aaKnown RBP13.8□□□□□ -0.2
NUP88-201ENST00000225696 MCM9Q9NXL9 1143 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
NUP88-201ENST00000225696 ESYT3A0FGR9 886 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 STXBP3O00186 592 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
NUP88-201ENST00000225696 ATP6V1AP38606 617 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 TECP42680 631 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 LETM2Q2VYF4 491 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 CAVIN4Q5BKX8 364 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 TADA2BQ86TJ2 420 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 TRIM58Q8NG06 486 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 BCAS4Q8TDM0 211 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 MTMR8Q96EF0 704 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 CAPS2Q9BXY5 557 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 ROBO1Q9Y6N7 1651 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 BUB1O43683 1085 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 FAM153BP0C7A2 387 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 KIF5BP33176 963 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 GNGT1P63211 74 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 CDK17Q00537 523 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 GFPT1Q06210 699 aaPredicted RBP13.79□□□□□ -0.2
NUP88-201ENST00000225696 UBE4AQ14139 1066 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 TRADDQ15628 312 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 FAM153CQ494X1 144 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 KCTD16Q68DU8 428 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 ANKRD18AQ8IVF6 992 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 FNBP4Q8N3X1 1017 aaPredicted RBP13.79□□□□□ -0.2
NUP88-201ENST00000225696 ACSBG1Q96GR2 724 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 TLR10Q9BXR5 811 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 MMRN2Q9H8L6 949 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 FAM153AQ9UHL3 310 aa13.79□□□□□ -0.2
NUP88-201ENST00000225696 A0A1W2PQJ5 194 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 CCNT1O60563 726 aaKnown RBP13.78□□□□□ -0.2
NUP88-201ENST00000225696 TOM1O60784 492 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 KRT14P02533 472 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 GLI1P08151 1106 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 DNA2P51530 1060 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 RRAGAQ7L523 313 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 EFCAB13Q8IY85 973 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 NOC3LQ8WTT2 800 aaKnown RBP13.78□□□□□ -0.2
NUP88-201ENST00000225696 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
NUP88-201ENST00000225696 SH3GLB2Q9NR46 395 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms