RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 COPB1P53618 953 aaKnown RBP27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 IL17AQ16552 155 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 WWC2Q6AWC2 1192 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 MICALL2Q8IY33 904 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 ZNF444Q8N0Y2 327 aaPredicted RBP27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 CEP112Q8N8E3 955 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 NOC3LQ8WTT2 800 aaKnown RBP27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 CCSER1Q9C0I3 900 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 RNF181Q9P0P0 153 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 SERPINB13Q9UIV8 391 aa27.99■■■□□ 2.07
RUNDC3A-201ENST00000225441 COL2A1P02458 1487 aaPredicted RBP27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 N4BP3O15049 544 aa27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 TFAP4Q01664 338 aa27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 NOM1Q5C9Z4 860 aaKnown RBP27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 TCP11X2Q5H9J9 407 aa27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 RAD9BQ6WBX8 426 aa27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 PNMA1Q8ND90 353 aa27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 EHD4Q9H223 541 aa27.98■■■□□ 2.07
RUNDC3A-201ENST00000225441 SOWAHDA6NJG2 315 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 WNT10BO00744 389 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 NMT2O60551 498 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 GYPCP04921 128 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 CYP26C1Q6V0L0 522 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 DTHD1Q6ZMT9 781 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 SH3BP5LQ7L8J4 393 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 CCDC12Q8WUD4 166 aaPredicted RBP27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 NELFBQ8WX92 580 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 MRPL44Q9H9J2 332 aaKnown RBP27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 CNOT7Q9UIV1 285 aaKnown RBP27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 ATRNL1Q5VV63 1379 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 CCDC194A0A1B0GVG4 234 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 DDTLA6NHG4 134 aaPredicted RBP27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 PPP1R2P41236 205 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 STAT6P42226 847 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 GPC2Q8N158 579 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 MTRQ99707 1265 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 DISC1Q9NRI5 854 aa27.97■■■□□ 2.07
RUNDC3A-201ENST00000225441 CASP14P31944 242 aa27.96■■■□□ 2.07
RUNDC3A-201ENST00000225441 FKBP1CQ5VVH2 108 aa27.96■■■□□ 2.07
RUNDC3A-201ENST00000225441 ZSCAN29Q8IWY8 852 aaPredicted RBP27.96■■■□□ 2.07
RUNDC3A-201ENST00000225441 SWAP70Q9UH65 585 aa27.96■■■□□ 2.07
RUNDC3A-201ENST00000225441 CDC23Q9UJX2 597 aa27.96■■■□□ 2.07
RUNDC3A-201ENST00000225441 KCNJ18B7U540 433 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 TCP10L2B9ZVM9 353 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 EEF1GP26641 437 aaKnown RBP27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 CASP1P29466 404 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 ORC2Q13416 577 aaPredicted RBP27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 STIM1Q13586 685 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 KCNJ12Q14500 433 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 NBPF9Q3BBW0 867 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 TAF3Q5VWG9 929 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 AK8Q96MA6 479 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 DESI2Q9BSY9 194 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 PI4KBQ9UBF8 816 aa27.95■■■□□ 2.07
RUNDC3A-201ENST00000225441 A0A1W2PQC6 194 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 TSPY3P0CV98 308 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 TSPY8P0CW00 308 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 SMARCA1P28370 1054 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 BRD3Q15059 726 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 ZNF771Q7L3S4 317 aaPredicted RBP27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 SRGAP1Q7Z6B7 1085 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 SMYD4Q8IYR2 804 aaPredicted RBP27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 ADSSL1Q8N142 457 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 THAP9Q9H5L6 903 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 VEZTQ9HBM0 779 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 IL17RBQ9NRM6 502 aa27.95■■■□□ 2.06
RUNDC3A-201ENST00000225441 SIPA1L1O43166 1804 aa27.94■■■□□ 2.06
RUNDC3A-201ENST00000225441 TUBBP07437 444 aa27.94■■■□□ 2.06
RUNDC3A-201ENST00000225441 GPR162Q16538 588 aa27.94■■■□□ 2.06
RUNDC3A-201ENST00000225441 RBM26Q5T8P6 1007 aaKnown RBP27.94■■■□□ 2.06
RUNDC3A-201ENST00000225441 C9orf131Q5VYM1 1079 aa27.94■■■□□ 2.06
RUNDC3A-201ENST00000225441 BLZF1Q9H2G9 400 aa27.94■■■□□ 2.06
RUNDC3A-201ENST00000225441 ABHD10Q9NUJ1 306 aa27.94■■■□□ 2.06
RUNDC3A-201ENST00000225441 EGFRP00533 1210 aa27.93■■■□□ 2.06
RUNDC3A-201ENST00000225441 MTF1Q14872 753 aa27.93■■■□□ 2.06
RUNDC3A-201ENST00000225441 KARSQ15046 597 aaKnown RBP27.93■■■□□ 2.06
RUNDC3A-201ENST00000225441 FAM151AQ8WW52 585 aa27.93■■■□□ 2.06
RUNDC3A-201ENST00000225441 BARHL2Q9NY43 387 aa27.93■■■□□ 2.06
RUNDC3A-201ENST00000225441 MAD2L2Q9UI95 211 aa27.93■■■□□ 2.06
RUNDC3A-201ENST00000225441 CNTNAP1P78357 1384 aa27.93■■■□□ 2.06
RUNDC3A-201ENST00000225441 HOXA7P31268 230 aaPredicted RBP27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 SAMD7Q7Z3H4 446 aa27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 NEDD1Q8NHV4 660 aa27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 PALM3A6NDB9 673 aaPredicted RBP27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 SHMT1P34896 483 aa27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 FXR1P51114 621 aaKnown RBP eCLIP27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 CC2D1AQ6P1N0 951 aaPredicted RBP27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 CCDC47Q96A33 483 aaKnown RBP27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 SPZ1Q9BXG8 430 aa27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 ARFGAP3Q9NP61 516 aa27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 PCDHA6Q9UN73 950 aa27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 PCDHA8Q9Y5H6 950 aa27.92■■■□□ 2.06
RUNDC3A-201ENST00000225441 CTAGE9A4FU28 777 aa27.91■■■□□ 2.06
RUNDC3A-201ENST00000225441 CCDC151A5D8V7 595 aa27.91■■■□□ 2.06
RUNDC3A-201ENST00000225441 RHOBTB3O94955 611 aa27.91■■■□□ 2.06
RUNDC3A-201ENST00000225441 TBC1D10BQ4KMP7 808 aaPredicted RBP27.91■■■□□ 2.06
RUNDC3A-201ENST00000225441 FAM83AQ86UY5 434 aa27.91■■■□□ 2.06
RUNDC3A-201ENST00000225441 CPLX3Q8WVH0 158 aa27.91■■■□□ 2.06
RUNDC3A-201ENST00000225441 DHTKD1Q96HY7 919 aaPredicted RBP27.91■■■□□ 2.06
RUNDC3A-201ENST00000225441 UBXN6Q9BZV1 441 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 305.6 ms