RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TTYH1Q9H313 450 aaPredicted RBP17.61■□□□□ 0.41
UPK3A-201ENST00000216211 ADD3Q9UEY8 706 aaKnown RBP17.61■□□□□ 0.41
UPK3A-201ENST00000216211 GBF1Q92538 1859 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 KDM4AO75164 1064 aa17.6■□□□□ 0.41
UPK3A-201ENST00000216211 RNF207Q6ZRF8 634 aa17.6■□□□□ 0.41
UPK3A-201ENST00000216211 CDX2Q99626 313 aaPredicted RBP17.6■□□□□ 0.41
UPK3A-201ENST00000216211 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.6■□□□□ 0.41
UPK3A-201ENST00000216211 CPVLQ9H3G5 476 aa17.6■□□□□ 0.41
UPK3A-201ENST00000216211 HIP1O00291 1037 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 ZEB2O60315 1214 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 CABYRO75952 493 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 CD4P01730 458 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 PPIGQ13427 754 aaKnown RBP eCLIP17.59■□□□□ 0.41
UPK3A-201ENST00000216211 ITGA7Q13683 1181 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 DGKHQ86XP1 1220 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 SLC43A3Q8NBI5 491 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 UBA5Q9GZZ9 404 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 Q9Y3F1 56 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
UPK3A-201ENST00000216211 GRIN2DO15399 1336 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 WDR19Q8NEZ3 1342 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 B4E1Z4 1266 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 CSF2RAP15509 400 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 PSMC6P62333 389 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 USH1GQ495M9 461 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 GPATCH4Q5T3I0 446 aaKnown RBP17.58■□□□□ 0.4
UPK3A-201ENST00000216211 C16orf59Q7L2K0 433 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 IQCA1Q86XH1 822 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 TMEM199Q8N511 208 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 PNMA1Q8ND90 353 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 PNMA2Q9UL42 364 aa17.58■□□□□ 0.4
UPK3A-201ENST00000216211 LOC102724159A0A0B4J2E5 919 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 CYP2C18P33260 490 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 RPS6P62753 249 aaKnown RBP17.57■□□□□ 0.4
UPK3A-201ENST00000216211 PWP2Q15269 919 aaKnown RBP17.57■□□□□ 0.4
UPK3A-201ENST00000216211 CCDC178Q5BJE1 867 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 TMEM240Q5SV17 173 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 MYLIPQ8WY64 445 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 WDR11Q9BZH6 1224 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 IL25Q9H293 177 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 KAT14Q9H8E8 782 aa17.57■□□□□ 0.4
UPK3A-201ENST00000216211 UMODL1Q5DID0 1318 aa17.56■□□□□ 0.4
UPK3A-201ENST00000216211 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.56■□□□□ 0.4
UPK3A-201ENST00000216211 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.56■□□□□ 0.4
UPK3A-201ENST00000216211 RBM47A0AV96 593 aaKnown RBP17.56■□□□□ 0.4
UPK3A-201ENST00000216211 ACRP10323 421 aa17.56■□□□□ 0.4
UPK3A-201ENST00000216211 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
UPK3A-201ENST00000216211 ZSCAN10Q96SZ4 725 aaPredicted RBP17.56■□□□□ 0.4
UPK3A-201ENST00000216211 CUL9Q8IWT3 2517 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 TNKSO95271 1327 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 B4GALT4O60513 344 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 DNAJB2P25686 324 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 PDE4AP27815 886 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 NT5C2P49902 561 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 PDE4DQ08499 809 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 CDC37Q16543 378 aaPredicted RBP17.55■□□□□ 0.4
UPK3A-201ENST00000216211 ZNF365Q70YC5 407 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 ADGRF4Q8IZF3 695 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
UPK3A-201ENST00000216211 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 ANKS1AQ92625 1134 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 TRPV6Q9H1D0 765 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 HIPK3Q9H422 1215 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 CTNNA3Q9UI47 895 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 SCN5AQ14524 2016 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 SCN10AQ9Y5Y9 1956 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 MYH7BA7E2Y1 1941 aa17.55■□□□□ 0.4
UPK3A-201ENST00000216211 MYL3P08590 195 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 EDNRBP24530 442 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 PSRC1Q6PGN9 363 aaPredicted RBP17.54■□□□□ 0.4
UPK3A-201ENST00000216211 DNERQ8NFT8 737 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 TBC1D5Q92609 795 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 COPS5Q92905 334 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 MPHOSPH6Q99547 160 aaKnown RBP17.54■□□□□ 0.4
UPK3A-201ENST00000216211 SEZ6LQ9BYH1 1024 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 KRT23Q9C075 422 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 IL23AQ9NPF7 189 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 POLR3EQ9NVU0 708 aa17.54■□□□□ 0.4
UPK3A-201ENST00000216211 ABCB11O95342 1321 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 PRUNE2Q8WUY3 3088 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 TMEM265A0A087WTH1 108 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 GRXCR1A8MXD5 290 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 GSPT1P15170 499 aaKnown RBP17.53■□□□□ 0.4
UPK3A-201ENST00000216211 FOSL2P15408 326 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 CPT1AP50416 773 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 CCL23P55773 120 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 PURAQ00577 322 aaKnown RBP17.53■□□□□ 0.4
UPK3A-201ENST00000216211 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 ASPRV1Q53RT3 343 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 RASIP1Q5U651 963 aa17.53■□□□□ 0.4
UPK3A-201ENST00000216211 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.53■□□□□ 0.4
UPK3A-201ENST00000216211 MAFAQ8NHW3 353 aaPredicted RBP17.53■□□□□ 0.4
UPK3A-201ENST00000216211 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
UPK3A-201ENST00000216211 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.4
UPK3A-201ENST00000216211 QRICH1Q2TAL8 776 aa17.52■□□□□ 0.4
UPK3A-201ENST00000216211 TTC22Q5TAA0 569 aa17.52■□□□□ 0.4
UPK3A-201ENST00000216211 RGS22Q8NE09 1264 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms