RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 FXR1P51114 621 aaKnown RBP eCLIP20.31■□□□□ 0.84
SLC22A4-201ENST00000200652 ZSCAN29Q8IWY8 852 aaPredicted RBP20.31■□□□□ 0.84
SLC22A4-201ENST00000200652 NYAP2Q9P242 653 aa20.31■□□□□ 0.84
SLC22A4-201ENST00000200652 SERPINA10Q9UK55 444 aa20.31■□□□□ 0.84
SLC22A4-201ENST00000200652 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.31■□□□□ 0.844e-6■■□□□ 11.6
SLC22A4-201ENST00000200652 NPM3O75607 178 aaKnown RBP20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 MRPL12P52815 198 aaKnown RBP20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 ASIC1P78348 528 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 AMPD3Q01432 767 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 PDE4DQ08499 809 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 AOC3Q16853 763 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 TMEM266Q2M3C6 531 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 PPP4R3AQ6IN85 833 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 CNGA4Q8IV77 575 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 C7orf43Q8WVR3 580 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 CNKSR1Q969H4 720 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 CCDC47Q96A33 483 aaKnown RBP20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 DHTKD1Q96HY7 919 aaPredicted RBP20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 DESI2Q9BSY9 194 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 KANSL2Q9H9L4 492 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 MYH7BA7E2Y1 1941 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 PDIA5Q14554 519 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 TTI2Q6NXR4 508 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 TATDN1Q6P1N9 297 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 CCDC51Q96ER9 411 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 PNMA5Q96PV4 448 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 SRRTQ9BXP5 876 aaKnown RBP20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 THAP9Q9H5L6 903 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 BLOC1S4Q9NUP1 217 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 EXOC1Q9NV70 894 aa20.3■□□□□ 0.84
SLC22A4-201ENST00000200652 RAD9BQ6WBX8 426 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 SIAH1Q8IUQ4 282 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 TRIM47Q96LD4 638 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 PSTPIP2Q9H939 334 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 FECHP22830 423 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 STK4Q13043 487 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 SLFN13Q68D06 897 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 DCAF4Q8WV16 495 aa20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 V9GYY5 206 aaPredicted RBP20.29■□□□□ 0.84
SLC22A4-201ENST00000200652 POTEMA6NI47 508 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 RAD21O60216 631 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 TPM1P09493 284 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 EEF1GP26641 437 aaKnown RBP20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 SLC1A4P43007 532 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 UBXN1Q04323 297 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 SEPT2Q15019 361 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 SV2BQ7L1I2 683 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 ARID3AQ99856 593 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 DUSP9Q99956 384 aaKnown RBP20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 TRIM34Q9BYJ4 488 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 RAB34Q9BZG1 259 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 STK17AQ9UEE5 414 aa20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 ATF5Q9Y2D1 282 aaPredicted RBP20.28■□□□□ 0.84
SLC22A4-201ENST00000200652 RNF225M0QZC1 329 aaPredicted RBP20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 FCER1AP12319 257 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 QRICH1Q2TAL8 776 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 CCDC94Q9BW85 323 aaPredicted RBP20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 DDX25Q9UHL0 483 aaKnown RBP20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 CCDC175P0C221 793 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 CCNE1P24864 410 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 TRIM14Q14142 442 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 MCM6Q14566 821 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 NOC3LQ8WTT2 800 aaKnown RBP20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 P2RX5Q93086 422 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 NUDT12Q9BQG2 462 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 TDRD3Q9H7E2 651 aaKnown RBP20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 MRPL44Q9H9J2 332 aaKnown RBP20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 ADGRG1Q9Y653 693 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 RGPD3A6NKT7 1758 aaPredicted RBP20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 RGPD4Q7Z3J3 1758 aa20.27■□□□□ 0.84
SLC22A4-201ENST00000200652 RXRBP28702 533 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 LARP4BQ92615 738 aaKnown RBP20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 HAS1Q92839 578 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 CDK5RAP3Q96JB5 506 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 GTPBP4Q9BZE4 634 aaKnown RBP20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 ARFGEF1Q9Y6D6 1849 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 MYMKA6NI61 221 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 LGALS16A8MUM7 142 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 GNG11P61952 73 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 ICA1Q05084 483 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 COBLL1Q53SF7 1204 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 ANKRD40Q6AI12 368 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 TMEM179Q6ZVK1 233 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 CSGALNACT2Q8N6G5 542 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 ZNF507Q8TCN5 953 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 NUP88Q99567 741 aaPredicted RBP20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 ABHD10Q9NUJ1 306 aa20.26■□□□□ 0.83
SLC22A4-201ENST00000200652 BICDL2A1A5D9 508 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 PPP1R2P41236 205 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 SLC15A2Q16348 729 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 KRT79Q5XKE5 535 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 CNNM4Q6P4Q7 775 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 KIAA0895Q8NCT3 520 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 LRRN4CLQ8ND94 238 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 SNX29Q8TEQ0 813 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 WDR24Q96S15 920 aa20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 CGNQ9P2M7 1197 aaKnown RBP20.25■□□□□ 0.83
SLC22A4-201ENST00000200652 MAGEC2Q9UBF1 373 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms