RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 CDC25AP30304 524 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 CALCRLQ16602 461 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 IGSF22Q8N9C0 903 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 TRIML1Q8N9V2 468 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 SMARCE1Q969G3 411 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 PAGE5Q96GU1 130 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 RLFQ13129 1914 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 FXR2P51116 673 aaKnown RBP eCLIP17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 KARSQ15046 597 aaKnown RBP17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 C9orf131Q5VYM1 1079 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 AOPEPQ8N6M6 819 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 TRIM44Q96DX7 344 aaPredicted RBP17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 WDR18Q9BV38 432 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 MAN1B1Q9UKM7 699 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 PTPRFP10586 1907 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 GOLGA6L19H0YKK7 550 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 BMP6P22004 513 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 UBA7P41226 1012 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 MTMR2Q13614 643 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 NAALADL2Q58DX5 795 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 MOXD1Q6UVY6 613 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 KLRG1Q96E93 195 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 MBOAT7Q96N66 472 aa17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 DDX25Q9UHL0 483 aaKnown RBP17.65■□□□□ 0.42
LAPTM4A-201ENST00000175091 BECN2A8MW95 431 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 FOSP01100 380 aaPredicted RBP17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 VCAM1P19320 739 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 SREBF1P36956 1147 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 USP11P51784 963 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 USP14P54578 494 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 DPYDQ12882 1025 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 DGKZQ13574 1117 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 MORC3Q14149 939 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 ISM2Q6H9L7 571 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 CCDC174Q6PII3 467 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 ZKSCAN4Q969J2 545 aaPredicted RBP17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 SLF1Q9BQI6 1058 aa17.64■□□□□ 0.41
LAPTM4A-201ENST00000175091 CYP3A7-CYP3A51PA0A087WV96 503 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 SPDYE3A6NKU9 549 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 SMC2O95347 1197 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 PTPRAP18433 802 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 CYP3A7P24462 503 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 STAT6P42226 847 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 AFMP43652 599 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 PLCB2Q00722 1185 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 NOL9Q5SY16 702 aaKnown RBP17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 SARM1Q6SZW1 724 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 MTRQ99707 1265 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 AS3MTQ9HBK9 375 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 FZD1Q9UP38 647 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 COL11A1P12107 1806 aaPredicted RBP17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 ABCB11O95342 1321 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 TECP42680 631 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 TXKP42681 527 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 ARHGAP4P98171 946 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 SUPT20HL1Q3ZLR7 823 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 HS1BP3Q53T59 392 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 CABP7Q86V35 215 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 HAS1Q92839 578 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 L3MBTL3Q96JM7 780 aaPredicted RBP17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 PICK1Q9NRD5 415 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 EMILIN3Q9NT22 766 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 ZNF536O15090 1300 aa17.63■□□□□ 0.41
LAPTM4A-201ENST00000175091 SCN4AP35499 1836 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 IKBKBO14920 756 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 ICAM1P05362 532 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 BACE1P56817 501 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 NCAPHQ15003 741 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 TMEM266Q2M3C6 531 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 PRPF38AQ8NAV1 312 aaKnown RBP17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 ZNF280CQ8ND82 737 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.414e-16■■■□□ 15.8
LAPTM4A-201ENST00000175091 GSDMAQ96QA5 445 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 MMTAG2Q9BU76 263 aaKnown RBP17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 KCNMB3Q9NPA1 279 aa17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
LAPTM4A-201ENST00000175091 GTPBP6O43824 516 aaPredicted RBP17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 CASP1P29466 404 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 HOXA13P31271 388 aaPredicted RBP17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 SPP2Q13103 211 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 RRAGBQ5VZM2 374 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 LDHDQ86WU2 507 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 PLA2G4DQ86XP0 818 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 RASSF8Q8NHQ8 419 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 LRRC15Q8TF66 581 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 C12orf42Q96LP6 360 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 RAB34Q9BZG1 259 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 MAGEF1Q9HAY2 307 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 LOC285556D6RIA3 1793 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 PDIA5Q14554 519 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 MLKLQ8NB16 471 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 TANGO6Q9C0B7 1094 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 LRWD1Q9UFC0 647 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 PPP1R9AQ9ULJ8 1098 aa17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 ZC3H4Q9UPT8 1303 aaKnown RBP17.61■□□□□ 0.41
LAPTM4A-201ENST00000175091 POTEMA6NI47 508 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms