RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Nt5c2Q3V1L4 560 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 NfrkbQ6PIJ4 1296 aaKnown RBP15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Tbc1d10bQ8BHL3 798 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Znf784Q8BI69 297 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Cdkn2aipQ8BI72 563 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Osbpl2Q8BX94 484 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 SdsQ8VBT2 327 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Terf2ipQ91VL8 393 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Rassf3Q99P51 232 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Cep72Q9D3R3 646 aa15.82■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Nfx1B1AY10 1114 aaKnown RBP15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 LtkP08923 888 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Pgk2P09041 417 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Aco1P28271 889 aaKnown RBP15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Ddx4Q61496 702 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 PhkbQ7TSH2 1085 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Moxd2Q7TT41 619 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Kdm4aQ8BW72 1064 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 RptorQ8K4Q0 1335 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Kctd10Q922M3 315 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Bloc1s2Q9CWG9 143 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Kdm8Q9CXT6 414 aa15.81■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Aox1O54754 1333 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Tex13cD3YU32 604 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Zc3h7bF8VPP8 982 aaKnown RBP15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Dnm1P39053 867 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 LyarQ08288 388 aaKnown RBP15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 St18Q80TY4 1045 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Dlg1Q811D0 905 aaKnown RBP15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Kctd3Q8BFX3 815 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Gjc2Q8BQU6 440 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 LRWD1Q8BUI3 648 aaKnown RBP15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Mrpl58Q8R035 206 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Kbtbd4Q8R179 534 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Bhmt2Q91WS4 363 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 ZwintQ9CQU5 252 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Tfcp2Q9ERA0 502 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Tbx20Q9ES03 445 aa15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 SktA2AQ25 1946 aaKnown RBP15.8■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Gm38655A0A286YDK6 273 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Arhgap4B1AUY3 965 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Gm4758L7N258 96 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 PtpreP49446 699 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Wdr70Q3TWF6 657 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Tmem63bQ3TWI9 832 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Cdc14aQ6GQT0 603 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Cyp26b1Q811W2 512 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Yars2Q8BYL4 472 aaKnown RBP15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Nup88Q8CEC0 753 aaKnown RBP15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Kcnj14Q8JZN3 434 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Pqbp1Q91VJ5 263 aaKnown RBP15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Vwa5aQ99KC8 793 aaKnown RBP15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Plod3Q9R0E1 741 aa15.79■□□□□ 0.12
Ercc1-203ENSMUST00000160369 TrdnE9Q9K5 693 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Tdo2P48776 406 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Rbp3P49194 1234 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Ccdc85aQ5SP85 500 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Prpf40bQ80W14 870 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Tdp1Q8BJ37 609 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Kcnv2Q8CFS6 562 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Ankrd54Q91WK7 299 aa15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Maged1Q9QYH6 775 aaKnown RBP15.78■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Astn1Q61137 1302 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Zfp853A0A1D5RM95 733 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Pgap3A2A559 320 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Pitpnm1O35954 1243 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Lnx1O70263 728 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Btg4O70552 250 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Sept4P28661 478 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 CgnP59242 1191 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Znf652Q5DU09 608 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Foxd1Q61345 456 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Ccdc172Q810N9 267 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Me3Q8BMF3 604 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Gripap1Q8VD04 806 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Ndufb9Q9CQJ8 179 aa15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Xrn2Q9DBR1 951 aaKnown RBP15.77■□□□□ 0.12
Ercc1-203ENSMUST00000160369 Cplx1P63040 134 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 StamP70297 548 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Cnnm3Q32NY4 713 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Tnni3kQ5GIG6 834 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Ppp1r9bQ6R891 817 aaKnown RBP15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Gigyf2Q6Y7W8 1291 aaKnown RBP15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Nap1l4Q78ZA7 375 aaKnown RBP15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Rusc1Q8BG26 893 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Acnat2Q8BGG9 420 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Taco1Q8K0Z7 294 aaKnown RBP15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Hdhd5Q91WM2 419 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Nr2e3Q9QXZ7 395 aa15.76■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Gm44511A0A0N4SW10 223 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Oip5A2AQ14 241 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Itgb5O70309 798 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Mt-CybP00158 381 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 FosbP13346 338 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 RarbP22605 482 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Klrb1bP27812 223 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Rfx1P48377 963 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Kcna2P63141 499 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Cntnap5bQ0V8T8 1292 aa15.75■□□□□ 0.11
Ercc1-203ENSMUST00000160369 Rasip1Q3U0S6 961 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms