RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Metap2O08663 478 aaKnown RBP11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Xrcc6P23475 608 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Eif4a1P60843 406 aaKnown RBP11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 MagohP61327 146 aaKnown RBP11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ccdc127Q3TC33 260 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ankrd13cQ3UX43 541 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Rbm12b2Q66JV4 834 aaKnown RBP11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Cyp4f39Q8BGU0 532 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 NemfQ8CCP0 1064 aaKnown RBP11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Kcnj14Q8JZN3 434 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Kcnq3Q8K3F6 873 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Lgi2Q8K4Z0 550 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Cdk9Q99J95 372 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 MagohbQ9CQL1 146 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Tcp1P11983 556 aaKnown RBP11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ctnna1P26231 906 aaKnown RBP11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Lrrcc1Q69ZB0 1026 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Cys1Q8R4T1 145 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ulk4Q3V129 1303 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Arap3Q8R5G7 1538 aa11.22□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Alox15P39654 663 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Gucy2fQ5SDA5 1108 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Adora1Q60612 326 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Prdm1Q60636 856 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ripor2Q80U16 1078 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Wasf2Q8BH43 497 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Erich5Q8K0S2 362 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Abcf3Q8K268 709 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Rrp15Q9CYX7 281 aaKnown RBP11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Fam84aQ9D650 292 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Cul3Q9JLV5 768 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 PapolbQ9WVP6 641 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Pitpnm2Q6ZPQ6 1335 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Col20a1Q923P0 1320 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 DccP70211 1447 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Trappc11B2RXC1 1133 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 HelqQ2VPA6 1069 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 C87499Q3UX49 493 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Daam2Q80U19 1115 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Scfd2Q8BTY8 684 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Vcpip1Q8CDG3 1220 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Rassf9Q8K342 435 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Gucy1a3Q9ERL9 691 aa11.21□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Dctn1O08788 1281 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ptpn20O55082 426 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Carmil2Q3V3V9 1296 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tpp2Q64514 1262 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Lrrc4cQ8C031 640 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 NelfbQ8C4Y3 580 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Proser2Q8C5R2 471 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Igf2bp3Q9CPN8 579 aaKnown RBP11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 2310002L09RikQ9D7L5 217 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Speer4bQ9D9F7 267 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Plcb1Q9Z1B3 1216 aa11.21□□□□□ -0.62
Ctc1-202ENSMUST00000116359 PtprvP70289 1705 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tcp10bE9PYJ0 438 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ccdc85cE9Q6B2 420 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ampd3O08739 766 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Me1P06801 572 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Mx1P09922 631 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Trim43aQ3TL54 445 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Rexo4Q6PAQ4 432 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cpa1Q7TPZ8 419 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ublcp1Q8BGR9 318 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cnot10Q8BH15 744 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Dis3l2Q8CI75 870 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Kcnh5Q920E3 988 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tktl2Q9D4D4 627 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Noa1Q9JJG9 693 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Rgs17Q9QZB0 210 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 DgkiD3YWQ0 1071 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 PurbO35295 324 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Parp2O88554 559 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Pak1O88643 545 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Oprl1P35377 367 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Hspa9P38647 679 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Triml1Q8BVP1 470 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Inpp5fQ8CDA1 1132 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Mettl13Q91YR5 698 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Krt23Q99PS0 422 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Rpf2Q9JJ80 306 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Scgb2b12S4R2L0 112 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cep126Q0VBV7 1103 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Smndc1Q8BGT7 238 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ranbp6Q8BIV3 1105 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tspyl4Q8VD63 406 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Pcdhga10Q91XY9 930 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Klra17Q9JMA4 273 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Abhd2Q9QXM0 425 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cps1Q8C196 1500 aa11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Nup153E9Q3G8 1462 aaKnown RBP11.2□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Zfp853A0A1D5RM95 733 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 ErmardE9Q048 622 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Mex3cQ05A36 652 aaKnown RBP11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Nop9Q8BMC4 636 aaKnown RBP11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 NcaldQ91X97 193 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Xpo6Q924Z6 1125 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 MipepA6H611 711 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 PctpP53808 214 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ddb1Q3U1J4 1140 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms