RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Trex1Q91XB0 314 aa20.31■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Ddah1Q9CWS0 285 aa20.31■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Tgm5Q9D7I9 724 aa20.31■□□□□ 0.84
Chmp6-201ENSMUST00000026434 VirmaA2AIV2 1811 aaKnown RBP20.31■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Col1a1P11087 1453 aa20.31■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Dnaaf5B9EJR8 853 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Usp17ldG5E8G2 545 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Usp17lcG5E8I7 545 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 LdhbP16125 334 aaKnown RBP20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Kifap3P70188 793 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Meis2P97367 477 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 D130040H23RikQ8BII3 405 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Exoc1Q8R3S6 894 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Sertad1Q9JL10 236 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Lypla2Q9WTL7 231 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Plcb1Q9Z1B3 1216 aa20.3■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Apol7aB2RT54 418 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Apol10bG3X9K7 334 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Ugt1a6bK9J7B2 531 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Copb2O55029 905 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Pde4aO89084 844 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Trpc6Q61143 930 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Ugt1a6Q64435 531 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Ugt1a7cQ6ZQM8 531 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Phldb2Q8K1N2 1249 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Oxnad1Q8VE38 311 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Snapc2Q91XA5 359 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 MymkQ9D1N4 221 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Gm10378F6XQQ1 160 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Dnm2P39054 870 aaKnown RBP20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Psmc2P46471 433 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Rps12P63323 132 aaKnown RBP20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Peg10Q7TN75 958 aaKnown RBP20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Cracr2bQ80ZJ8 394 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Etf1Q8BWY3 437 aaKnown RBP20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Kbtbd13Q8C828 458 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Txndc5Q91W90 417 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Vav3Q9R0C8 847 aa20.29■□□□□ 0.84
Chmp6-201ENSMUST00000026434 CatspereP0DP43 985 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 AgtP11859 477 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Setd4P58467 439 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Xxylt1Q3U4G3 392 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Gpatch11Q3UFS4 262 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Foxn3Q499D0 457 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Madcam1Q61826 405 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 LdhdQ7TNG8 484 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Prpf40bQ80W14 870 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Mei4Q8BRM6 389 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 MslnlQ8C160 685 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Q8C5C9 218 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Rbm42Q91V81 474 aaKnown RBP20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Tor1aip1Q921T2 595 aaKnown RBP20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 GrapQ9CX99 217 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 AmfrQ9R049 643 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Dock2Q8C3J5 1828 aa20.28■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Arhgap4B1AUY3 965 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Rsph10bE9PYQ0 876 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Gm4307E9PZY4 289 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Akr1c19G3X9Y6 323 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Gm4312K9J7E2 289 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Diaph1O08808 1255 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Pstpip1P97814 415 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Gucy2cQ3UWA6 1072 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Ankrd40Q5SUE8 363 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Ppp2r2cQ8BG02 447 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Dclk3Q8BWQ5 790 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Haus2Q9CQS9 234 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Prkab1Q9R078 270 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Vstm4T1NXB5 319 aa20.27■□□□□ 0.84
Chmp6-201ENSMUST00000026434 Rfpl4bJ3QPR6 266 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 PpardP35396 440 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Sfi1Q3UZY0 1216 aaKnown RBP20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Slc9a2Q3ZAS0 814 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Bbs9Q811G0 885 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Arhgef19Q8BWA8 802 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Setdb2Q8C267 713 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Dppa3Q8QZY3 150 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Ces1Q8VCC2 565 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Smtnl1Q99LM3 459 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Arhgef25Q9CWR0 618 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Tmem192Q9CXT7 266 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Mfap3lQ9D3X9 409 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Tfr2Q9JKX3 798 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Git2Q9JLQ2 708 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Zfp646Q6NV66 1788 aa20.26■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Mcm6P97311 821 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Nom1Q3UFM5 854 aaKnown RBP20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Nlrp2Q4PLS0 1046 aaKnown RBP20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Igbp1Q61249 340 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 TfrcQ62351 763 aaKnown RBP20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Vil1Q62468 827 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Sass6Q80UK7 654 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Cd209bQ8CJ91 325 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Mettl5Q8K1A0 209 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 CutaQ9CQ89 177 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Q9DAQ4 598 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 EhhadhQ9DBM2 718 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 NpcdF8VQB8 469 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 EmbP21995 330 aa20.25■□□□□ 0.83
Chmp6-201ENSMUST00000026434 Jakmip3Q5DTN8 844 aa20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms