RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 USP17L13C9JLJ4 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L11C9JVI0 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L18D6R9N7 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L22D6RA61 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L17D6RBQ6 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L19D6RCP7 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L20D6RJB6 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 WDR46O15213 610 aaKnown RBP20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L24Q0WX57 530 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L6PQ6QN14 398 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-232ENST00000641947 TBCKQ8TEA7 893 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 RBSNQ9H1K0 784 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 FEM1BQ9UK73 627 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 BMP15O95972 392 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 VCAM1P19320 739 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 MAP3K11Q16584 847 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 CCDC174Q6PII3 467 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 CHURC1Q8WUH1 139 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 LPAR1Q92633 364 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 PICK1Q9NRD5 415 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 SNCAIPQ9Y6H5 919 aa20.05■□□□□ 0.8
PHGDH-232ENST00000641947 MEIS2O14770 477 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 KINO60870 393 aaKnown RBP20.04■□□□□ 0.8
PHGDH-232ENST00000641947 ZNF202O95125 648 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 LETM1O95202 739 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-232ENST00000641947 BACE1P56817 501 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 SAMD1Q6SPF0 538 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-232ENST00000641947 NEK8Q86SG6 692 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 FAM160B2Q86V87 743 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 ZNF579Q8NAF0 562 aaKnown RBP20.04■□□□□ 0.8
PHGDH-232ENST00000641947 ZNF280CQ8ND82 737 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 GRPEL1Q9HAV7 217 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 ZHX2Q9Y6X8 837 aa20.04■□□□□ 0.8
PHGDH-232ENST00000641947 VGLL4Q14135 290 aa20.03■□□□□ 0.8
PHGDH-232ENST00000641947 LETM2Q2VYF4 491 aa20.03■□□□□ 0.8
PHGDH-232ENST00000641947 CDCA5Q96FF9 252 aa20.03■□□□□ 0.8
PHGDH-232ENST00000641947 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.85e-6■■□□□ 11.5
PHGDH-232ENST00000641947 MRPL12P52815 198 aaKnown RBP20.03■□□□□ 0.8
PHGDH-232ENST00000641947 ZC3H15Q8WU90 426 aaKnown RBP20.03■□□□□ 0.8
PHGDH-232ENST00000641947 ERCC4Q92889 916 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-232ENST00000641947 FERMT2Q96AC1 680 aa20.03■□□□□ 0.8
PHGDH-232ENST00000641947 TSPY26PQ9H489 355 aa20.03■□□□□ 0.8
PHGDH-232ENST00000641947 LOC285556D6RIA3 1793 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-232ENST00000641947 VWA3AA6NCI4 1184 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 POTEIP0CG38 1075 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 POTEJP0CG39 1038 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 SYKP43405 635 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 EAPPQ56P03 285 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-232ENST00000641947 EPSTI1Q96J88 318 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 AS3MTQ9HBK9 375 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 KCNH3Q9ULD8 1083 aa20.02■□□□□ 0.8
PHGDH-232ENST00000641947 ZNF536O15090 1300 aa20.02■□□□□ 0.79
PHGDH-232ENST00000641947 A0A087X0B3 334 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 CCNT1O60563 726 aaKnown RBP20.01■□□□□ 0.79
PHGDH-232ENST00000641947 USP14P54578 494 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 HMGCS2P54868 508 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 MOB2Q70IA6 237 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 SLF1Q9BQI6 1058 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 TANGO6Q9C0B7 1094 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 RPAP3Q9H6T3 665 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-232ENST00000641947 AFG3L2Q9Y4W6 797 aa20.01■□□□□ 0.79
PHGDH-232ENST00000641947 TDP2O95551 362 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 MAP3K9P80192 1104 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 SYMPKQ92797 1274 aaKnown RBP20■□□□□ 0.79
PHGDH-232ENST00000641947 SLC37A4O43826 429 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 LONRF3Q496Y0 759 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 ARL6IP4Q66PJ3 421 aaKnown RBP20■□□□□ 0.79
PHGDH-232ENST00000641947 POTEDQ86YR6 584 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 TBC1D5Q92609 795 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 WNK4Q96J92 1243 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 C12orf42Q96LP6 360 aa20■□□□□ 0.79
PHGDH-232ENST00000641947 ZBTB4Q9P1Z0 1013 aaPredicted RBP20■□□□□ 0.79
PHGDH-232ENST00000641947 A0A087WWV3 80 aa19.99■□□□□ 0.79
PHGDH-232ENST00000641947 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
PHGDH-232ENST00000641947 MRE11P49959 708 aa19.99■□□□□ 0.79
PHGDH-232ENST00000641947 PRPF38AQ8NAV1 312 aaKnown RBP19.99■□□□□ 0.79
PHGDH-232ENST00000641947 AGBL1Q96MI9 1066 aa19.99■□□□□ 0.79
PHGDH-232ENST00000641947 ANO3Q9BYT9 981 aa19.99■□□□□ 0.79
PHGDH-232ENST00000641947 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
PHGDH-232ENST00000641947 GLT8D2Q9H1C3 349 aa19.99■□□□□ 0.79
PHGDH-232ENST00000641947 FLOT1O75955 427 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 HOXA13P31271 388 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-232ENST00000641947 TYRO3Q06418 890 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 LDHDQ86WU2 507 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 CRYGNQ8WXF5 182 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 CLMNQ96JQ2 1002 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 TIGD1Q96MW7 591 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 PPP1R9AQ9ULJ8 1098 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 CTAGE5O15320 804 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 POLR2DO15514 142 aaKnown RBP19.98■□□□□ 0.79
PHGDH-232ENST00000641947 PPP1R12BO60237 982 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-232ENST00000641947 NEMFO60524 1076 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 L1TD1Q5T7N2 865 aaKnown RBP19.98■□□□□ 0.79
PHGDH-232ENST00000641947 RNF214Q8ND24 703 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 SLC38A10Q9HBR0 1119 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 FAM13BQ9NYF5 915 aa19.98■□□□□ 0.79
PHGDH-232ENST00000641947 FOXN1O15353 648 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms