RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 PSTPIP2Q9H939 334 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 CCPG1Q9ULG6 757 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 PCDHA4Q9UN74 947 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 ADAMTS5Q9UNA0 930 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 ZNF536O15090 1300 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 ESYT2A0FGR8 921 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 MANSC4A6NHS7 340 aaPredicted RBP10.06□□□□□ -0.8
HLA-B-258ENST00000640615 BTBD19C9JJ37 291 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 ADAMTS3O15072 1205 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 ADCY7P51828 1080 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 MRPL12P52815 198 aaKnown RBP10.06□□□□□ -0.8
HLA-B-258ENST00000640615 HERVK_113P62684 666 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 NR5A1Q13285 461 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 PLS1Q14651 629 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 BICD2Q8TD16 824 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 CUL5Q93034 780 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 PNMA2Q9UL42 364 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 MRPL11Q9Y3B7 192 aaKnown RBP10.06□□□□□ -0.8
HLA-B-258ENST00000640615 ATP6V1DQ9Y5K8 247 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 ABCB11O95342 1321 aa10.06□□□□□ -0.8
HLA-B-258ENST00000640615 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
HLA-B-258ENST00000640615 FAM155AB1AL88 458 aaPredicted RBP10.05□□□□□ -0.8
HLA-B-258ENST00000640615 AOC2O75106 756 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 CYP2C8P10632 490 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 ALAS1P13196 640 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
HLA-B-258ENST00000640615 STAT3P40763 770 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 OAZ1P54368 228 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 TMEM132BQ14DG7 1078 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 NPY5RQ15761 445 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 SNRNP48Q6IEG0 339 aaKnown RBP10.05□□□□□ -0.8
HLA-B-258ENST00000640615 FAM173BQ6P4H8 233 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 BRAPQ7Z569 592 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 NOSTRINQ8IVI9 506 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 FAM43AQ8N2R8 423 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 DAGLBQ8NCG7 672 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 REPS2Q8NFH8 660 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 RASGRP4Q8TDF6 673 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 SMCR8Q8TEV9 937 aaPredicted RBP10.05□□□□□ -0.8
HLA-B-258ENST00000640615 PTPN18Q99952 460 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 PAGR1Q9BTK6 254 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 RIC8AQ9NPQ8 531 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 HOMER2Q9NSB8 354 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 TMEM260Q9NX78 707 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 BIN2Q9UBW5 565 aaPredicted RBP10.05□□□□□ -0.8
HLA-B-258ENST00000640615 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 SLC45A1Q9Y2W3 748 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
HLA-B-258ENST00000640615 TNRC18O15417 2968 aaPredicted RBP10.04□□□□□ -0.8
HLA-B-258ENST00000640615 CCDC194A0A1B0GVG4 234 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 ATP2A1O14983 1001 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 PEX10O60683 326 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 NCLP19338 710 aaKnown RBP10.04□□□□□ -0.8
HLA-B-258ENST00000640615 INHBEP58166 350 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 UBE2SQ16763 222 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 LBX2Q6XYB7 198 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 PIK3AP1Q6ZUJ8 805 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 REXO1Q8N1G1 1221 aaKnown RBP10.04□□□□□ -0.8
HLA-B-258ENST00000640615 MB21D1Q8N884 522 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 CHAMP1Q96JM3 812 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 TRERF1Q96PN7 1200 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 GBP4Q96PP9 640 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 BEGAINQ9BUH8 593 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 TEX13BQ9BXU2 312 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 BTBD7Q9P203 1132 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 ZNF214Q9UL59 606 aaPredicted RBP10.04□□□□□ -0.8
HLA-B-258ENST00000640615 RIPK3Q9Y572 518 aa10.04□□□□□ -0.8
HLA-B-258ENST00000640615 BAZ2BQ9UIF8 2168 aaKnown RBP10.04□□□□□ -0.8
HLA-B-258ENST00000640615 GCOM1H8Y6P7 765 aaPredicted RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 M0R2N6 131 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 CNMDO75829 334 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 CFBP00751 764 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 POLR2MP0CAP2 368 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 ATP2B1P20020 1258 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 HOXA13P31271 388 aaPredicted RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 DNM1Q05193 864 aaKnown RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 SREBF2Q12772 1141 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 NOGQ13253 232 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 TKFCQ3LXA3 575 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 NOM1Q5C9Z4 860 aaKnown RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 MUM1L1Q5H9M0 696 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 EARS2Q5JPH6 523 aaKnown RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 MYSM1Q5VVJ2 828 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 USP17L6PQ6QN14 398 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 KRT25Q7Z3Z0 450 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 GTF3C2Q8WUA4 911 aaPredicted RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 TNFRSF25Q93038 417 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 ZNF396Q96N95 335 aaPredicted RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 ZIC5Q96T25 663 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 PARK7Q99497 189 aaKnown RBP10.03□□□□□ -0.8
HLA-B-258ENST00000640615 SPATC1LQ9H0A9 340 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 RNF146Q9NTX7 359 aa10.03□□□□□ -0.8
HLA-B-258ENST00000640615 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms