RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 F8W031 263 aaPredicted RBP6.59□□□□□ -1.35
AP3S1-209ENST00000640413 H0Y8X5 98 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 SHOXO15266 292 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 SRGAP3O43295 1099 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 TACR1P25103 407 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 PRR5P85299 388 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 SAPCD2Q86UD0 394 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 DDX1Q92499 740 aaKnown RBP6.59□□□□□ -1.35
AP3S1-209ENST00000640413 PRR13Q9NZ81 148 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 MYRFQ9Y2G1 1151 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 FAN1Q9Y2M0 1017 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 DUSP10Q9Y6W6 482 aa6.59□□□□□ -1.35
AP3S1-209ENST00000640413 HTRA3P83110 453 aa6.58□□□□□ -1.36
AP3S1-209ENST00000640413 ZNF827Q17R98 1081 aa6.58□□□□□ -1.36
AP3S1-209ENST00000640413 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
AP3S1-209ENST00000640413 CCDC144CPQ8IYA2 1237 aa6.58□□□□□ -1.36
AP3S1-209ENST00000640413 REXO1Q8N1G1 1221 aaKnown RBP6.58□□□□□ -1.36
AP3S1-209ENST00000640413 PDLIM7Q9NR12 457 aa6.58□□□□□ -1.36
AP3S1-209ENST00000640413 SUCOQ9UBS9 1254 aaKnown RBP6.58□□□□□ -1.36
AP3S1-209ENST00000640413 PALD1Q9ULE6 856 aa6.58□□□□□ -1.36
AP3S1-209ENST00000640413 MEIS3P2A8K0S8 358 aa6.57□□□□□ -1.36
AP3S1-209ENST00000640413 FGF10O15520 208 aaPredicted RBP6.57□□□□□ -1.36
AP3S1-209ENST00000640413 CNR2P34972 360 aa6.57□□□□□ -1.36
AP3S1-209ENST00000640413 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
AP3S1-209ENST00000640413 APOBRQ0VD83 1088 aa6.57□□□□□ -1.36
AP3S1-209ENST00000640413 LRRFIP1Q32MZ4 808 aaKnown RBP6.57□□□□□ -1.36
AP3S1-209ENST00000640413 TDRD10Q5VZ19 366 aaKnown RBP6.57□□□□□ -1.36
AP3S1-209ENST00000640413 BRF1Q92994 677 aa6.57□□□□□ -1.36
AP3S1-209ENST00000640413 BCAS3Q9H6U6 928 aa6.57□□□□□ -1.36
AP3S1-209ENST00000640413 RXFP1Q9HBX9 757 aa6.57□□□□□ -1.36
AP3S1-209ENST00000640413 DBR1Q9UK59 544 aaKnown RBP6.57□□□□□ -1.36
AP3S1-209ENST00000640413 SH3D21A4FU49 640 aa6.56□□□□□ -1.36
AP3S1-209ENST00000640413 ASGR2P07307 311 aa6.56□□□□□ -1.36
AP3S1-209ENST00000640413 ACRP10323 421 aa6.56□□□□□ -1.36
AP3S1-209ENST00000640413 MAGEA10P43363 369 aaPredicted RBP6.56□□□□□ -1.36
AP3S1-209ENST00000640413 ZNF165P49910 485 aa6.56□□□□□ -1.36
AP3S1-209ENST00000640413 DCAF15Q66K64 600 aa6.56□□□□□ -1.36
AP3S1-209ENST00000640413 NKD1Q969G9 470 aa6.56□□□□□ -1.36
AP3S1-209ENST00000640413 GGT7Q9UJ14 662 aa6.56□□□□□ -1.36
AP3S1-209ENST00000640413 CNOT11Q9UKZ1 510 aaKnown RBP6.56□□□□□ -1.36
AP3S1-209ENST00000640413 NOBOXO60393 691 aa6.55□□□□□ -1.36
AP3S1-209ENST00000640413 NCAM1P13591 858 aa6.55□□□□□ -1.36
AP3S1-209ENST00000640413 ERICH6Q7L0X2 663 aa6.55□□□□□ -1.36
AP3S1-209ENST00000640413 CARFQ8N187 725 aa6.55□□□□□ -1.36
AP3S1-209ENST00000640413 ALG3Q92685 438 aa6.55□□□□□ -1.36
AP3S1-209ENST00000640413 DHRS1Q96LJ7 313 aa6.55□□□□□ -1.36
AP3S1-209ENST00000640413 FCRL3Q96P31 734 aaPredicted RBP6.55□□□□□ -1.36
AP3S1-209ENST00000640413 RNF38Q9H0F5 515 aa6.55□□□□□ -1.36
AP3S1-209ENST00000640413 ZNF445P59923 1031 aa6.54□□□□□ -1.36
AP3S1-209ENST00000640413 NOL9Q5SY16 702 aaKnown RBP6.54□□□□□ -1.36
AP3S1-209ENST00000640413 CYP2R1Q6VVX0 501 aa6.54□□□□□ -1.36
AP3S1-209ENST00000640413 USP48Q86UV5 1035 aa6.54□□□□□ -1.36
AP3S1-209ENST00000640413 PPFIBP1Q86W92 1011 aa6.54□□□□□ -1.36
AP3S1-209ENST00000640413 NOX5Q96PH1 765 aa6.54□□□□□ -1.36
AP3S1-209ENST00000640413 SRRTQ9BXP5 876 aaKnown RBP6.54□□□□□ -1.36
AP3S1-209ENST00000640413 AKAP8O43823 692 aaKnown RBP6.53□□□□□ -1.36
AP3S1-209ENST00000640413 IFNGR1P15260 489 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 NOP2P46087 812 aaKnown RBP6.53□□□□□ -1.36
AP3S1-209ENST00000640413 ADAM17P78536 824 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 AXDND1Q5T1B0 1012 aaPredicted RBP6.53□□□□□ -1.36
AP3S1-209ENST00000640413 SLITRK4Q8IW52 837 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 PTCHD1Q96NR3 888 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 LNPKQ9C0E8 428 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 GP6Q9HCN6 339 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 SMPD4Q9NXE4 827 aa6.53□□□□□ -1.36
AP3S1-209ENST00000640413 TP53P04637 393 aaPredicted RBP6.52□□□□□ -1.37
AP3S1-209ENST00000640413 ITGB3P05106 788 aa6.52□□□□□ -1.37
AP3S1-209ENST00000640413 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
AP3S1-209ENST00000640413 PMLP29590 882 aa6.52□□□□□ -1.37
AP3S1-209ENST00000640413 PMS1P54277 932 aaKnown RBP6.52□□□□□ -1.37
AP3S1-209ENST00000640413 ZXDAP98168 799 aa6.52□□□□□ -1.37
AP3S1-209ENST00000640413 INTS3Q68E01 1043 aaKnown RBP6.52□□□□□ -1.37
AP3S1-209ENST00000640413 B3GNT8Q7Z7M8 397 aa6.52□□□□□ -1.37
AP3S1-209ENST00000640413 FIBCD1Q8N539 461 aa6.52□□□□□ -1.37
AP3S1-209ENST00000640413 TBC1D8O95759 1140 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 CD3EP07766 207 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 GLI4P10075 376 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 L1CAMP32004 1257 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 CORO7P57737 925 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 GJA9P57773 515 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 HS2ST1Q7LGA3 356 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 NLGN2Q8NFZ4 835 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 SMARCC2Q8TAQ2 1214 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 RBM15Q96T37 977 aaKnown RBP eCLIP6.51□□□□□ -1.37
AP3S1-209ENST00000640413 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 SPATA6Q9NWH7 488 aaPredicted RBP6.51□□□□□ -1.37
AP3S1-209ENST00000640413 ZNF451Q9Y4E5 1061 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 FHOD1Q9Y613 1164 aa6.51□□□□□ -1.37
AP3S1-209ENST00000640413 MATN3O15232 486 aa6.5□□□□□ -1.37
AP3S1-209ENST00000640413 CD247P20963 164 aa6.5□□□□□ -1.37
AP3S1-209ENST00000640413 ITGAEP38570 1179 aa6.5□□□□□ -1.37
AP3S1-209ENST00000640413 SARSP49591 514 aaKnown RBP6.5□□□□□ -1.37
AP3S1-209ENST00000640413 ZDHHC15Q96MV8 337 aa6.5□□□□□ -1.37
AP3S1-209ENST00000640413 NOL6Q9H6R4 1146 aaKnown RBP6.5□□□□□ -1.37
AP3S1-209ENST00000640413 FBLN5Q9UBX5 448 aa6.5□□□□□ -1.37
AP3S1-209ENST00000640413 ZNF761Q86XN6 746 aaPredicted RBP6.49□□□□□ -1.37
AP3S1-209ENST00000640413 RGS22Q8NE09 1264 aa6.49□□□□□ -1.37
AP3S1-209ENST00000640413 ZYXQ15942 572 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms