RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ZCWPW1Q9H0M4 648 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 OSBPL5Q9H0X9 879 aaPredicted RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC87Q9NVE4 849 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 BTG4Q9NY30 223 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CLIC4Q9Y696 253 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 V9GY48 417 aaPredicted RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 OVOS2A0A0G2JMS6 1433 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 DISP2A7MBM2 1401 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 RBM47A0AV96 593 aaKnown RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CYP27B1O15528 508 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 ADD2P35612 726 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CTCFP49711 727 aaPredicted RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC6Q16204 474 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 POTEAQ6S8J7 498 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC13Q8IYE1 715 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF654Q8IZM8 581 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 FANCBQ8NB91 859 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 HNRNPLLQ8WVV9 542 aaKnown RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TEKT4Q8WW24 435 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
SCARB2-218ENST00000639715 TATDN2Q93075 761 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 SLAIN2Q9P270 581 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 FAM184BQ9ULE4 1060 aa6.27□□□□□ -1.41
SCARB2-218ENST00000639715 VWA3AA6NCI4 1184 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 M0R2C6 588 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 MAP2K7O14733 419 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 HIP1RO75146 1068 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ATP6V1G1O75348 118 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 RTN3O95197 1032 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ADAMTS2O95450 1211 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 HNRNPCP07910 306 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 LIFRP42702 1097 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 STX17P56962 302 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 TSNAXIP1Q2TAA8 658 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 PGBD1Q96JS3 809 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 OSBPL1AQ9BXW6 950 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 FOXP1Q9H334 677 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 RHBDL2Q9NX52 303 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 STK38LQ9Y2H1 464 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 VIRMAQ69YN4 1812 aaKnown RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 AHCYL1O43865 530 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 AKR1B10O60218 316 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 COQ9O75208 318 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 PARP1P09874 1014 aaKnown RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 IDEP14735 1019 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ERCC5P28715 1186 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ADORA1P30542 326 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ADKP55263 362 aaKnown RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 CTDSPL2Q05D32 466 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 TRIM28Q13263 835 aaKnown RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 PNOCQ13519 176 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF174Q15697 407 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ANKRD23Q86SG2 305 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 GBP7Q8N8V2 638 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 MCM9Q9NXL9 1143 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 GUCA1BQ9UMX6 200 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF232Q9UNY5 417 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 AXIN2Q9Y2T1 843 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 SYNRGQ9UMZ2 1314 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 IFNAR1P17181 557 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 MCM7P33993 719 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 IL6STP40189 918 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 PSMC4P43686 418 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 UBXN1Q04323 297 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 KIF5AQ12840 1032 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 ARMCX5Q6P1M9 558 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 CYP26C1Q6V0L0 522 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 TBC1D1Q86TI0 1168 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-218ENST00000639715 PALLDQ8WX93 1383 aa6.26□□□□□ -1.41
SCARB2-218ENST00000639715 DYTNA2CJ06 578 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 ERVV-1B6SEH8 477 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 STX10O60499 249 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 TACC1O75410 805 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PDHA1P08559 390 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 RAB27AP51159 221 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 ASIC1P78348 528 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 ROR2Q01974 943 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PPARAQ07869 468 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 HLTFQ14527 1009 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 SETDB1Q15047 1291 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 Q4G0T1 1027 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 HEATR3Q7Z4Q2 680 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 CCHCR1Q8TD31 782 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 DDX17Q92841 729 aaKnown RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 BPIFA3Q9BQP9 254 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 MTA3Q9BTC8 594 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 MYL10Q9BUA6 226 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 EHD4Q9H223 541 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 SERTAD1Q9UHV2 236 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 SH2B2O14492 632 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 FSBPO95073 299 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 FMNL1O95466 1100 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PYGBP11216 843 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 CNGA1P29973 690 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF76P36508 570 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 SCNN1BP51168 640 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 VAV2P52735 878 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 NAPAP54920 295 aa6.25□□□□□ -1.41
SCARB2-218ENST00000639715 PTPN21Q16825 1174 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms