RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TACR1P25103 407 aa2.57□□□□□ -2
LMBR1-222ENST00000638959 DAB2P98082 770 aa2.57□□□□□ -2
LMBR1-222ENST00000638959 DGCR2P98153 550 aa2.57□□□□□ -2
LMBR1-222ENST00000638959 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.57□□□□□ -2
LMBR1-222ENST00000638959 JAMLQ86YT9 394 aa2.57□□□□□ -2
LMBR1-222ENST00000638959 ANTXR1Q9H6X2 564 aa2.57□□□□□ -2
LMBR1-222ENST00000638959 PROB1E7EW31 1015 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 DDX3XO00571 662 aaKnown RBP eCLIP2.56□□□□□ -2
LMBR1-222ENST00000638959 PRAMEF1O95521 474 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 CYP2C8P10632 490 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 PLCG1P19174 1290 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 SSFA2P28290 1259 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 CEBPAP49715 358 aaPredicted RBP2.56□□□□□ -2
LMBR1-222ENST00000638959 EPHB4P54760 987 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 PPP2CBP62714 309 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 PPP2CAP67775 309 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 CACNB2Q08289 660 aaPredicted RBP2.56□□□□□ -2
LMBR1-222ENST00000638959 SLFN13Q68D06 897 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 TTBK2Q6IQ55 1244 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 PHACTR4Q8IZ21 702 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 LINC00482Q8N8I6 264 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 NAT16Q8N8M0 369 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 RETREG2Q8NC44 543 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 ADOQ96SZ5 270 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 PTPN18Q99952 460 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 RXFP1Q9HBX9 757 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 AP5S1Q9NUS5 200 aa2.56□□□□□ -2
LMBR1-222ENST00000638959 C9orf118A6NHY6 69 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 H3BRB1 525 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 RAMP2O60895 175 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 CYP1A1P04798 512 aaPredicted RBP2.55□□□□□ -2
LMBR1-222ENST00000638959 SNW1Q13573 536 aaKnown RBP2.55□□□□□ -2
LMBR1-222ENST00000638959 GLYCTKQ8IVS8 523 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 SLFN12Q8IYM2 578 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 NTN5Q8WTR8 489 aaPredicted RBP2.55□□□□□ -2
LMBR1-222ENST00000638959 CPA5Q8WXQ8 436 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 EXTL1Q92935 676 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 CCDC74BQ96LY2 380 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 CITED4Q96RK1 184 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 GORASP1Q9BQQ3 440 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 TUT1Q9H6E5 874 aaKnown RBP2.55□□□□□ -2
LMBR1-222ENST00000638959 PDLIM7Q9NR12 457 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 CORINQ9Y5Q5 1042 aa2.55□□□□□ -2
LMBR1-222ENST00000638959 MASP2O00187 686 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 MEIS1O00470 390 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 RNF4P78317 190 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 PCSK4Q6UW60 755 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 USP48Q86UV5 1035 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 LARP4BQ92615 738 aaKnown RBP2.54□□□□□ -2
LMBR1-222ENST00000638959 TSPAN17Q96FV3 270 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 BCANQ96GW7 911 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 C11orf84Q9BUA3 381 aaPredicted RBP2.54□□□□□ -2
LMBR1-222ENST00000638959 ADARB2Q9NS39 739 aaKnown RBP2.54□□□□□ -2
LMBR1-222ENST00000638959 PTGFRNQ9P2B2 879 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 KLHL3Q9UH77 587 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 MINPP1Q9UNW1 487 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 PCDHB5Q9Y5E4 795 aa2.54□□□□□ -2
LMBR1-222ENST00000638959 ICMTO60725 284 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 ZNF205O95201 554 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 CTGFP29279 349 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 GBP1P32455 592 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 PAPD7Q5XG87 772 aaKnown RBP2.53□□□□□ -2
LMBR1-222ENST00000638959 HLA-DQA1Q5Y7H0 255 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 AEBP1Q8IUX7 1158 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 KYQ8NBH2 561 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 TMEM52Q8NDY8 209 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 ALKBH8Q96BT7 664 aaKnown RBP2.53□□□□□ -2
LMBR1-222ENST00000638959 DMRTB1Q96MA1 342 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 SYT3Q9BQG1 590 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 SRCIN1Q9C0H9 1055 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 MEGF9Q9H1U4 602 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 MMRN2Q9H8L6 949 aa2.53□□□□□ -2
LMBR1-222ENST00000638959 SIGLEC6O43699 453 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 C8BP07358 591 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 C1SP09871 688 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 MAKP20794 623 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 BMP8BP34820 402 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 PRAMEF18Q5VWM3 479 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 STK32CQ86UX6 486 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 CABP7Q86V35 215 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 KBTBD2Q8IY47 623 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 ANKRD24Q8TF21 1146 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 PBXIP1Q96AQ6 731 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 PLEKHG4BQ96PX9 1271 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 KIF2CQ99661 725 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 CHST7Q9NS84 486 aa2.52□□□□□ -2.01
LMBR1-222ENST00000638959 INO80B-WBP1J3KQ70 363 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 U2SURPO15042 1029 aaKnown RBP2.51□□□□□ -2.01
LMBR1-222ENST00000638959 B4GALT4O60513 344 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 CDK4P11802 303 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 C21orf58P58505 322 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 ARHGAP4P98171 946 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 RPL6Q02878 288 aaKnown RBP2.51□□□□□ -2.01
LMBR1-222ENST00000638959 TRIM26Q12899 539 aaPredicted RBP2.51□□□□□ -2.01
LMBR1-222ENST00000638959 GPR162Q16538 588 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 NBPF9Q3BBW0 867 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 TMEM201Q5SNT2 666 aa2.51□□□□□ -2.01
LMBR1-222ENST00000638959 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms