RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 USP17L8P0C7I0 530 aa22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 CCNE1P24864 410 aa22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 ZBED6P86452 979 aa22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 SPTY2D1Q68D10 685 aaPredicted RBP22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 LEKR1Q6ZMV7 388 aa22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 CCDC102AQ96A19 550 aa22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 EIF3CQ99613 913 aaKnown RBP22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 HDAC6Q9UBN7 1215 aa22.51■■□□□ 1.19
SYNGAP1-227ENST00000638142 ANO9A1A5B4 782 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 LRRIQ3A6PVS8 624 aaPredicted RBP22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 P2RX5Q93086 422 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 TCP11L1Q9NUJ3 509 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 TFCP2L1Q9NZI6 479 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 MKRN1Q9UHC7 482 aaKnown RBP22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 ROBO3Q96MS0 1386 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 STXBP3O00186 592 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 RGL2O15211 777 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 HEATR3Q7Z4Q2 680 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 DZIP1Q86YF9 867 aaKnown RBP22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 MARCH10Q8NA82 808 aaPredicted RBP22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 MMS19Q96T76 1030 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 COL5A3P25940 1745 aaPredicted RBP22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 FLT1P17948 1338 aa22.5■■□□□ 1.19
SYNGAP1-227ENST00000638142 RPS6KA5O75582 802 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 TBC1D8BQ0IIM8 1120 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 FIGNQ5HY92 759 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 IVLP07476 585 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 CDK17Q00537 523 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 CABP7Q86V35 215 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 IQCDQ96DY2 449 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 PLIN2Q99541 437 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 LZTS2Q9BRK4 669 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 NHEJ1Q9H9Q4 299 aaPredicted RBP22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 AGPAT5Q9NUQ2 364 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 SPATA31A1Q5TZJ5 1347 aa22.49■■□□□ 1.19
SYNGAP1-227ENST00000638142 CYTH3O43739 400 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 PLCG1P19174 1290 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 AARSP49588 968 aaKnown RBP eCLIP22.48■■□□□ 1.192e-7■■□□□ 13.7
SYNGAP1-227ENST00000638142 SLC35G1Q2M3R5 365 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 LRRC15Q8TF66 581 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 CNOT6LQ96LI5 555 aaKnown RBP22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 TRIM9Q9C026 710 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 A0A1W2PQJ5 194 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 PURBQ96QR8 312 aaKnown RBP22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 C7orf25Q9BPX7 421 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 RASSF4Q9H2L5 321 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 MKNK2Q9HBH9 465 aa22.48■■□□□ 1.19
SYNGAP1-227ENST00000638142 RASSF10A6NK89 507 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 MYO1CO00159 1063 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 OR52Z1P0C646 297 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 PDE4DQ08499 809 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 ZSCAN29Q8IWY8 852 aaPredicted RBP22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 ERGIC2Q96RQ1 377 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 MYH1P12882 1939 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 PALM3A6NDB9 673 aaPredicted RBP22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 COBLL1Q53SF7 1204 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 SRLQ86TD4 932 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 AMOTL1Q8IY63 956 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 TSGA10Q9BZW7 698 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 LACRTQ9GZZ8 138 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 TFR2Q9UP52 801 aa22.47■■□□□ 1.19
SYNGAP1-227ENST00000638142 TSPY3P0CV98 308 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 TSPY8P0CW00 308 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 MTIF2P46199 727 aaKnown RBP22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 SLC4A8Q2Y0W8 1093 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 ANKRD40Q6AI12 368 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 KRT25Q7Z3Z0 450 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 NLRP3Q96P20 1036 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 NYXQ9GZU5 481 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 ZMYND12Q9H0C1 365 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 SRGAP2O75044 1071 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 AMPD3Q01432 767 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 TXNRD1Q16881 649 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 IQCEQ6IPM2 695 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 DYNLL2Q96FJ2 89 aa22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 NOC4LQ9BVI4 516 aaKnown RBP22.46■■□□□ 1.19
SYNGAP1-227ENST00000638142 USP17L3A6NCW0 530 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 USP17L4A6NCW7 530 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 RCCD1A6NED2 376 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 ASIC1P78348 528 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 MIIPQ5JXC2 388 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 BICDL1Q6ZP65 573 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 USP17L1Q7RTZ2 530 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 TRIM34Q9BYJ4 488 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 LCMT1Q9UIC8 334 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 NUTM2BA6NNL0 878 aaPredicted RBP22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 NUTM2EB1AL46 878 aaPredicted RBP22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 VAV2P52735 878 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 KIF5AQ12840 1032 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 STK4Q13043 487 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 FKBP15Q5T1M5 1219 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 CAPZA3Q96KX2 299 aa22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 PCMTD1Q96MG8 357 aaPredicted RBP22.45■■□□□ 1.18
SYNGAP1-227ENST00000638142 KLK7P49862 253 aa22.44■■□□□ 1.18
SYNGAP1-227ENST00000638142 NONOQ15233 471 aaKnown RBP eCLIP22.44■■□□□ 1.18
SYNGAP1-227ENST00000638142 TBC1D9BQ66K14 1250 aa22.44■■□□□ 1.18
SYNGAP1-227ENST00000638142 CNNM4Q6P4Q7 775 aa22.44■■□□□ 1.18
SYNGAP1-227ENST00000638142 ZNF444Q8N0Y2 327 aaPredicted RBP22.44■■□□□ 1.18
SYNGAP1-227ENST00000638142 FNBP4Q8N3X1 1017 aaPredicted RBP22.44■■□□□ 1.18
SYNGAP1-227ENST00000638142 SPZ1Q9BXG8 430 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms